RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ADAP00813 363 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 IFNA14P01570 189 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 BCHEP06276 602 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 LSM11P83369 360 aaKnown RBP eCLIP22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 FCN2Q15485 313 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 OR2G6Q5TZ20 316 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 C12orf73Q69YU5 71 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 C22orf39Q6P5X5 142 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 TMEM65Q6PI78 240 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 OR52N2Q8NGI0 321 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 TMEM159Q96B96 161 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 TVP23BQ9NYZ1 205 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 NDOR1Q9UHB4 597 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 IGLV3-16A0A075B6K0 115 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 MANSC4A6NHS7 340 aaPredicted RBP22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 SLC30A4O14863 429 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 TLX2O43763 284 aaPredicted RBP22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 HLA-FP30511 346 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 ZNF763Q0D2J5 394 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 PUM1Q14671 1186 aaKnown RBP eCLIP22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 RNF180Q86T96 592 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 GHDCQ8N2G8 530 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 ZNF366Q8N895 744 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 AIFM2Q9BRQ8 373 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 RIOK2Q9BVS4 552 aaKnown RBP22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 DIMT1Q9UNQ2 313 aaKnown RBP22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 RNASET2O00584 256 aaKnown RBP22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 EEF1A2Q05639 463 aaKnown RBP22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 LRRC32Q14392 662 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 SLBPQ14493 270 aaKnown RBP eCLIP22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 NPAS4Q8IUM7 802 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 CREB3L1Q96BA8 519 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 REEP4Q9H6H4 257 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 GSTK1Q9Y2Q3 226 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 MYO7AQ13402 2215 aa22.73■■□□□ 1.23
CSNK1E-203ENST00000396832 A0A0A6YYJ9 748 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 CHP2O43745 196 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 RAB36O95755 333 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 MPC1LP0DKB6 136 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 PTGER1P34995 402 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 AVPR1BP47901 424 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 CTBP2P56545 445 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 MPPE1Q53F39 396 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 PLEKHS1Q5SXH7 462 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 METAP1DQ6UB28 335 aaPredicted RBP22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 CAMKMTQ7Z624 323 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 CDH24Q86UP0 819 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 DNAJC5GQ8N7S2 189 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 TOR1AIP2Q8NFQ8 470 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 GATAD2BQ8WXI9 593 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 SORCS1Q8WY21 1168 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 OVCA2Q8WZ82 227 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 ABCG4Q9H172 646 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 NCKAP1Q9Y2A7 1128 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 SF3B6Q9Y3B4 125 aaKnown RBP22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 MYO10Q9HD67 2058 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 PRR23AA6NEV1 266 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 A8MUA0 341 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 SEMA7AO75326 666 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 FABP5Q01469 135 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 TLE2Q04725 743 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.72■■□□□ 1.235e-38■■■■■ 40.4
CSNK1E-203ENST00000396832 PCNPQ8WW12 178 aaKnown RBP22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 RSPO3Q9BXY4 272 aaPredicted RBP22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 PIGUQ9H490 435 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 TMEM38AQ9H6F2 299 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 ZNF224Q9NZL3 707 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 H0YIV9 168 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 GTPBP1O00178 669 aaKnown RBP22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 NCR1O76036 304 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 RAF1P04049 648 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 WDR5P61964 334 aaKnown RBP22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 TBPL1P62380 186 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 SP140Q13342 867 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 OCLNQ16625 522 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 QSOX2Q6ZRP7 698 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 COMMD7Q86VX2 200 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 ZFP41Q8N8Y5 198 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 GALNT11Q8NCW6 608 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 MED28Q9H204 178 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 STARD7Q9NQZ5 370 aa22.72■■□□□ 1.23
CSNK1E-203ENST00000396832 STK25O00506 426 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 IL3P08700 152 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 GABRR2P28476 465 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 WNT4P56705 351 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 COL9A2Q14055 689 aaPredicted RBP22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 SPIN4Q56A73 249 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 SHFQ7M4L6 423 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 KIF18BQ86Y91 864 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 LRRC17Q8N6Y2 441 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 ATF6BQ99941 703 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 FOLH1BQ9HBA9 442 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 SGK494L7N484 410 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 QSOX1O00391 747 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 RTCAO00442 366 aaKnown RBP22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 AKAP8O43823 692 aaKnown RBP22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 PRKYO43930 277 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 MAPK8P45983 427 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 TRIM40Q6P9F5 258 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms