RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZNF624Q9P2J8 865 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF197O14709 1029 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 RAB36O95755 333 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 CPN2P22792 545 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 CST5P28325 142 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-203ENST00000395060 BUD31P41223 144 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-203ENST00000395060 LIMS1P48059 325 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 PXNP49023 591 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-203ENST00000395060 FGFBP1Q14512 234 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 GPNMBQ14956 572 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 GRHL2Q6ISB3 625 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 MZT2BQ6NZ67 158 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 FAM20CQ8IXL6 584 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 LRRC20Q8TCA0 184 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 BTN2A2Q8WVV5 523 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 ZFPM2Q8WW38 1151 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF582Q96NG8 517 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-203ENST00000395060 RBFOX1Q9NWB1 397 aaKnown RBP13.56□□□□□ -0.24
CLIP2-203ENST00000395060 GULP1Q9UBP9 304 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 MGAT4AQ9UM21 535 aa13.56□□□□□ -0.24
CLIP2-203ENST00000395060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 GPR37L1O60883 481 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 GALTP07902 379 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 SELPP16109 830 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 MMP11P24347 488 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 AP1S2P56377 157 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 RRAS2P62070 204 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 MAB21L1Q13394 359 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 SPIN4Q56A73 249 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 SPOUT1Q5T280 376 aaKnown RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 FAM27D1Q5T7N8 215 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF730Q6ZMV8 503 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 CFAP206Q8IYR0 622 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 NEIL3Q8TAT5 605 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ARSGQ96EG1 525 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 WDFY2Q96P53 400 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 TTTY10Q9BZA0 68 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ITM2BQ9Y287 266 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 PRKRAO75569 313 aaKnown RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 IL1AP01583 271 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ARAFP10398 606 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 WNT4P56705 351 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 EEF1A2Q05639 463 aaKnown RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF630Q2M218 657 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ZER1Q7Z7L7 766 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 OR4K5Q8NGD3 323 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 C11orf24Q96F05 449 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 DPCDQ9BVM2 203 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 NKIRAS2Q9NYR9 191 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 CFAP97Q9P2B7 532 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 EXTL2Q9UBQ6 330 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 FAM183AA6NL82 134 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 HYAL3O43820 417 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 CATP04040 527 aaKnown RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 PEPDP12955 493 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 PTX3P26022 381 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ABATP80404 500 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 SMAP2Q8WU79 429 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF480Q8WV37 535 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 UFD1Q92890 307 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 MAGEB10Q96LZ2 347 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-203ENST00000395060 SAP130Q9H0E3 1048 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 CWH43Q9H720 699 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ATP13A2Q9NQ11 1180 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF224Q9NZL3 707 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 TAAR2Q9P1P5 351 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 GSTK1Q9Y2Q3 226 aa13.55□□□□□ -0.24
CLIP2-203ENST00000395060 A0A1W2PPK0 400 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ZC3H12DA2A288 527 aaKnown RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 PIPSLA2A3N6 862 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 TSPAN4O14817 238 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ADAP00813 363 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 C1QBP02746 253 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 URODP06132 367 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 WDR5P61964 334 aaKnown RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ILKQ13418 452 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 LHX8Q68G74 356 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 TMEM220Q6QAJ8 160 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 TRMT11Q7Z4G4 463 aaKnown RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 DNAJB7Q7Z6W7 309 aaPredicted RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ZNF431Q8TF32 576 aaPredicted RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ZSCAN5AQ9BUG6 496 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 FNDC11Q9BVV2 318 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 BHLHE41Q9C0J9 482 aaPredicted RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 GPBP1L1Q9HC44 474 aaPredicted RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 NUDT15Q9NV35 164 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 FBXW2Q9UKT8 454 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ZFR2Q9UPR6 939 aaKnown RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 H0YIV9 168 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 EEF1E1O43324 174 aaKnown RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ORC5O43913 435 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ATF4P18848 351 aaPredicted RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 ITGB7P26010 798 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 NNMTP40261 264 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 GIPRP48546 466 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 SLC30A6Q6NXT4 461 aa13.54□□□□□ -0.24
CLIP2-203ENST00000395060 METTL2BQ6P1Q9 378 aaKnown RBP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLIP2-203ENST00000395060 KAT2AQ92830 837 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms