RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TEPSINQ96N21 525 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 NAA50Q9GZZ1 169 aaKnown RBP16.42■□□□□ 0.22
SIN3A-203ENST00000394949 RGCCQ9H4X1 137 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 NMNAT1Q9HAN9 279 aaPredicted RBP16.42■□□□□ 0.22
SIN3A-203ENST00000394949 ERVK-19Q9WJR5 959 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 KDM3BQ7LBC6 1761 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 A0A1B0GVT2 93 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 SCDO00767 359 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
SIN3A-203ENST00000394949 SCGB1D2O95969 90 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 DRD2P14416 443 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 PRKACAP17612 351 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 HNF1BP35680 557 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 TMEM115Q12893 351 aaPredicted RBP16.42■□□□□ 0.22
SIN3A-203ENST00000394949 SELPLGQ14242 412 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 GFOD2Q3B7J2 385 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 KCTD18Q6PI47 426 aaPredicted RBP16.42■□□□□ 0.22
SIN3A-203ENST00000394949 METTL4Q8N3J2 472 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 THAP4Q8WY91 577 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 PMEPA1Q969W9 287 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 C20orf27Q9GZN8 174 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 KCNN3Q9UGI6 736 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 CACNG2Q9Y698 323 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 INPPL1O15357 1258 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 ZNF208O43345 1280 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 UGDHO60701 494 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 VNN2O95498 520 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 ZNF8P17098 575 aaPredicted RBP16.42■□□□□ 0.22
SIN3A-203ENST00000394949 ADH6P28332 368 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 PRKXP51817 358 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 WNT7BP56706 349 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 GSTM4Q03013 218 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 CBFBQ13951 182 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 CLECL1Q8IZS7 167 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 DGAT2Q96PD7 388 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 PFDN5Q99471 154 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 MRI1Q9BV20 369 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 NANSQ9NR45 359 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 IL37Q9NZH6 218 aa16.42■□□□□ 0.22
SIN3A-203ENST00000394949 TRBV2A0A0J9YWF9 115 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 IL1AP01583 271 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 IL4RP24394 825 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 NRG3P56975 720 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 ACTBP60709 375 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 ACTG1P63261 375 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 NRROSQ86YC3 692 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.41■□□□□ 0.222e-7■■■■■ 64.2
SIN3A-203ENST00000394949 IGSF8Q969P0 613 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 FKBP10Q96AY3 582 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 SHDQ96IW2 340 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 OR51J1Q9H342 316 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 SC5DO75845 299 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 FOXA1P55317 472 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 TP53INP2Q8IXH6 220 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 TRAM1L1Q8N609 369 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 OR7G1Q8NGA0 311 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 NECAB3Q96P71 396 aaPredicted RBP16.41■□□□□ 0.22
SIN3A-203ENST00000394949 HIST1H2AAQ96QV6 131 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 GSKIPQ9P0R6 139 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 PCDHGA2Q9Y5H1 932 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 IGKV6D-21A0A0A0MT36 114 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 A0A1W2PQ09 198 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 LAMP1P11279 417 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 JUNBP17275 347 aaPredicted RBP16.41■□□□□ 0.22
SIN3A-203ENST00000394949 TNFSF8P32971 234 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 SOX2P48431 317 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 LRRC37A5PQ49AS3 106 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 GRASPQ7Z6J2 395 aaPredicted RBP16.41■□□□□ 0.22
SIN3A-203ENST00000394949 B3GNT7Q8NFL0 401 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 URB1O60287 2271 aaKnown RBP16.41■□□□□ 0.22
SIN3A-203ENST00000394949 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 FMO6PO60774 539 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 S1PR1P21453 382 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 APOFQ13790 326 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 TEAD2Q15562 447 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 NHSL2Q5HYW2 709 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 TMEM205Q6UW68 189 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 SUSD1Q6UWL2 747 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 TMPRSS12Q86WS5 348 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 TESCQ96BS2 214 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 METTL2AQ96IZ6 378 aaKnown RBP16.41■□□□□ 0.22
SIN3A-203ENST00000394949 SERINC1Q9NRX5 453 aa16.41■□□□□ 0.22
SIN3A-203ENST00000394949 LEFTY2O00292 366 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 FXYD6P3P58550 94 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 DECR1Q16698 335 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 BCL7AQ4VC05 210 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 FAM69AQ5T7M9 428 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 MANEALQ5VSG8 457 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ALKBH2Q6NS38 261 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ZFP41Q8N8Y5 198 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 OR10A4Q9H209 315 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 TREX1Q9NSU2 369 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 FBXL3Q9UKT7 428 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ACOT8O14734 319 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 CSTBP04080 98 aaKnown RBP16.4■□□□□ 0.22
SIN3A-203ENST00000394949 C8orf89P0DMQ9 161 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 SRCP12931 536 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 HRH2P25021 359 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 GLP1RP43220 463 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms