RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PCNX1Q96RV3 2341 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 NCOA6Q14686 2063 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-205ENST00000394892 POLQO75417 2590 aa8.14□□□□□ -1.11
ATG4A-205ENST00000394892 IQANK1A0A1B0GTG1 560 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ATP6AP2A0A1C7CYW4 349 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 PRRG2O14669 202 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ATP6AP2O75787 350 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 SUPT7LO94864 414 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 TOXO94900 526 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 PROCP04070 461 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 COX7A2P14406 83 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 CD1EP15812 388 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 PORP16435 677 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 IGFBP2P18065 325 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 GPX3P22352 226 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ATP5F1P24539 256 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 FEN1P39748 380 aaKnown RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ADH7P40394 386 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ARL1P40616 181 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 PTGDSP41222 190 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 PHEXP78562 749 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 HMGCS1Q01581 520 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 PLGLB1Q02325 96 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 TLE4Q04727 773 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 IFT88Q13099 833 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 BIKQ13323 160 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 EXOSC7Q15024 291 aaKnown RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 TRMT12Q53H54 448 aaKnown RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 SLC22A10Q63ZE4 541 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 TTC19Q6DKK2 380 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ARHGAP11AQ6P4F7 1023 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 RNF111Q6ZNA4 994 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 LIX1LQ8IVB5 337 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 GALNT12Q8IXK2 581 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 IFT20Q8IY31 132 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 PRR22Q8IZ63 422 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 LRRC25Q8N386 305 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 FBXW8Q8N3Y1 598 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 SLC15A4Q8N697 577 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 CEP112Q8N8E3 955 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ADCY4Q8NFM4 1077 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 OR4K14Q8NGD5 310 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 OR5M3Q8NGP4 307 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 CA5BP1Q8WTZ4 195 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 SDCCAG3Q96C92 435 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 L3HYPDHQ96EM0 354 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 SMC6Q96SB8 1091 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ENKD1Q9H0I2 346 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 OR10A5Q9H207 317 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 SLC6A15Q9H2J7 730 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ELOVL6Q9H5J4 265 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 ZNF703Q9H7S9 590 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 L2HGDHQ9H9P8 463 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 BRF2Q9HAW0 419 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 MCCC2Q9HCC0 563 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 PRM3Q9NNZ6 103 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 COQ3Q9NZJ6 369 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 FETUBQ9UGM5 382 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 TBK1Q9UHD2 729 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 RNF6Q9Y252 685 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 IKBKGQ9Y6K9 419 aa8.13□□□□□ -1.11
ATG4A-205ENST00000394892 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.13□□□□□ -1.11
ATG4A-205ENST00000394892 C2orf92A0A1B0GVN3 265 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 NKX2-6A6NCS4 301 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 OR6C76A6NM76 312 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 C17orf51A8MQB3 221 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 KIF2AO00139 706 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-205ENST00000394892 P04436 131 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 ATP1B1P05026 303 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 ABCB1P08183 1280 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-205ENST00000394892 GLI4P10075 376 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 PCSK2P16519 638 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 PIK3R1P27986 724 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 SERPINB3P29508 390 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 SLCO1A2P46721 670 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 EMDP50402 254 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 MAPK12P53778 367 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 MRPS35P82673 323 aaKnown RBP8.12□□□□□ -1.11
ATG4A-205ENST00000394892 PMPCAQ10713 525 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 MAP4K2Q12851 820 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 NNATQ16517 81 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 C10orf62Q5T681 223 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-205ENST00000394892 RGS9BPQ6ZS82 235 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 GK5Q6ZS86 529 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 GPRIN3Q6ZVF9 776 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 TAOK1Q7L7X3 1001 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 SLC22A16Q86VW1 577 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 FAM109AQ8N4B1 249 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 FAM13CQ8NE31 585 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 LILRB4Q8NHJ6 448 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATG4A-205ENST00000394892 SLC22A8Q8TCC7 542 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 SPPL2AQ8TCT8 520 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 HGDQ93099 445 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 TP53INP1Q96A56 240 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 MTBPQ96DY7 904 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 ART5Q96L15 291 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 NODALQ96S42 347 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 PELOQ9BRX2 385 aaKnown RBP8.12□□□□□ -1.11
ATG4A-205ENST00000394892 ITPAQ9BY32 194 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms