RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PRAMEF2O60811 474 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 CKMT1AP12532 417 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 FDXRP22570 491 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 RBMXP38159 391 aaKnown RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 VMACQ2NL98 169 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ALG10BQ5I7T1 473 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 LDLRAD1Q5T700 205 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ARHGAP12Q8IWW6 846 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 SPAG16Q8N0X2 631 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 NECAB3Q96P71 396 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 PCDH10Q9P2E7 1040 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 NKX1-2Q9UD57 310 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 MKLN1Q9UL63 735 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 H3BSA7 217 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 PTGESO14684 152 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 BRINP1O60477 761 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 GTF2F2P13984 249 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ELK4P28324 431 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 GPR4P46093 362 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 SLC26A5P58743 744 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 C18orf21Q32NC0 220 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 RABEPKQ7Z6M1 372 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF584Q8IVC4 421 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ZC3H3Q8IXZ2 948 aaKnown RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 SEC14L1Q92503 715 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ZC3H10Q96K80 434 aaKnown RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 APOOQ9BUR5 198 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 NANSQ9NR45 359 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 ACSL6Q9UKU0 697 aa9.91□□□□□ -0.82
COL4A6-203ENST00000394872 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
COL4A6-203ENST00000394872 GSTT2P0CG29 244 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 GCGRP47871 477 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 RGS19P49795 217 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 POU4F2Q12837 409 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 MAB21L1Q13394 359 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 BTBD16Q32M84 506 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 LYSMD4Q5XG99 296 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 MRPL10Q7Z7H8 261 aaKnown RBP9.9□□□□□ -0.82
COL4A6-203ENST00000394872 C16orf78Q8WTQ4 265 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 NANOS1Q8WY41 292 aaKnown RBP9.9□□□□□ -0.82
COL4A6-203ENST00000394872 ZFYVE21Q9BQ24 234 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 DPH2Q9BQC3 489 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-203ENST00000394872 ICKQ9UPZ9 632 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 TMEM14AQ9Y6G1 99 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 SIGLEC1Q9BZZ2 1709 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 MEIS3P2A8K0S8 358 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 PRAMEF26H0Y7S4 382 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 AURKAO14965 403 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 FRKP42685 505 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-203ENST00000394872 PXNP49023 591 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-203ENST00000394872 SCAPQ12770 1279 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 ATP6AP1Q15904 470 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF404Q494X3 552 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 EEF1A1P5Q5VTE0 462 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF431Q8TF32 576 aaPredicted RBP9.9□□□□□ -0.82
COL4A6-203ENST00000394872 BORCS6Q96GS4 357 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 BOCQ9BWV1 1114 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 TRAV6A0A075B6T7 132 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 P2RY2P41231 377 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 MAGEA8P43361 318 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 HK3P52790 923 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 SCGB1C1Q8TD33 95 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 TSPEARQ8WU66 669 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 URM1Q9BTM9 101 aaKnown RBP9.9□□□□□ -0.82
COL4A6-203ENST00000394872 BEX2Q9BXY8 128 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 NELFAQ9H3P2 528 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 BEX1Q9HBH7 125 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 GJD2Q9UKL4 321 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 SMCO3A2RU48 225 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 YES1P07947 543 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 CELP19835 753 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 HMGCLP35914 325 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 PHC1P78364 1004 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 ARHGAP11AQ6P4F7 1023 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 CEACAM19Q7Z692 300 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 TRAPPC6BQ86SZ2 158 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 LMO3Q8TAP4 145 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 TMEM68Q96MH6 324 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 SERINC2Q96SA4 455 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 SLC6A7Q99884 636 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 C2orf42Q9NWW7 574 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 KCNIP3Q9Y2W7 256 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 SPEF1Q9Y4P9 236 aa9.9□□□□□ -0.82
COL4A6-203ENST00000394872 RHCEP18577 417 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 POU3F4P49335 361 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 RCAN2Q14206 197 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 IER5LQ5T953 404 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 LIPKQ5VXJ0 399 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 HMBOX1Q6NT76 420 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 UEVLDQ8IX04 471 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 SAMD12Q8N8I0 201 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 OR52E2Q8NGJ4 325 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 STOML3Q8TAV4 291 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 SECISBP2Q96T21 854 aaKnown RBP9.9□□□□□ -0.83
COL4A6-203ENST00000394872 HOXD1Q9GZZ0 328 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 KATNBL1Q9H079 304 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 PELI2Q9HAT8 420 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 BAZ2AQ9UIF9 1905 aaKnown RBP9.9□□□□□ -0.83
COL4A6-203ENST00000394872 GXYLT2A0PJZ3 443 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 M0QZQ0 153 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms