RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SLC6A18Q96N87 628 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 PITX2Q99697 317 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 WARS2Q9UGM6 360 aaKnown RBP14.19□□□□□ -0.14
GPC3-202ENST00000394299 PILRAQ9UKJ1 303 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 PCDHGA10Q9Y5H3 936 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 SNX5Q9Y5X3 404 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 H0YGG7 62 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 FAM20BO75063 409 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 CCNB2O95067 398 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 MT-ND2P03891 347 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 SLC35G6P0C7Q6 338 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 ANXA8P13928 327 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 DDX5P17844 614 aaKnown RBP14.18□□□□□ -0.14
GPC3-202ENST00000394299 CPN2P22792 545 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 MPIP34949 423 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 MASP1P48740 699 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 NUDT6P53370 316 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 ARF3P61204 181 aaPredicted RBP14.18□□□□□ -0.14
GPC3-202ENST00000394299 GPAT3Q53EU6 434 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 SLC30A8Q8IWU4 369 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 FAM46DQ8NEK8 389 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 NUP43Q8NFH3 380 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 FAR1Q8WVX9 515 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 ZNF566Q969W8 418 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 ZNF354BQ96LW1 612 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 DUSP21Q9H596 190 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 SELENONQ9NZV5 590 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 HCN4Q9Y3Q4 1203 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 COL6A3P12111 3177 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 TNFSF14O43557 240 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 GUCY1B2O75343 617 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 SMIM10L1P0DMW3 83 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 NR2F6P10588 404 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 POU1F1P28069 291 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 UBE2IP63279 158 aaKnown RBP14.18□□□□□ -0.14
GPC3-202ENST00000394299 FAM111BQ6SJ93 734 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 KLHL17Q6TDP4 642 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 AHSA2Q719I0 299 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 TAGAPQ8N103 731 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 RSC1A1Q92681 617 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 SMIM10Q96HG1 83 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 DOK1Q99704 481 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 SH3GL3Q99963 347 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 TUBA1CQ9BQE3 449 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 ORAI3Q9BRQ5 295 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 OCEL1Q9H607 264 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 SEMA3GQ9NS98 782 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 GPC6Q9Y625 555 aaPredicted RBP14.18□□□□□ -0.14
GPC3-202ENST00000394299 ZNF780BQ9Y6R6 833 aa14.18□□□□□ -0.14
GPC3-202ENST00000394299 FRS3O43559 492 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 NDUFS2O75306 463 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 NTN1O95631 604 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 FADS2O95864 444 aaKnown RBP14.17□□□□□ -0.14
GPC3-202ENST00000394299 CTSEP14091 401 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 ZNF182P17025 639 aaPredicted RBP14.17□□□□□ -0.14
GPC3-202ENST00000394299 JUNDP17535 347 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 CBLP22681 906 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 GGT2P36268 569 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 XKP51811 444 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 SRSF5Q13243 272 aaKnown RBP14.17□□□□□ -0.14
GPC3-202ENST00000394299 DEFB110Q30KQ9 67 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 ZNF770Q6IQ21 691 aaPredicted RBP14.17□□□□□ -0.14
GPC3-202ENST00000394299 MEX3DQ86XN8 651 aaKnown RBP14.17□□□□□ -0.14
GPC3-202ENST00000394299 TMEM52Q8NDY8 209 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 OR7G2Q8NG99 324 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 NT5CQ8TCD5 201 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 MUL1Q969V5 352 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 OR7D2Q96RA2 312 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 ZNF607Q96SK3 696 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 FUNDC2Q9BWH2 189 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 PHF7Q9BWX1 381 aaPredicted RBP14.17□□□□□ -0.14
GPC3-202ENST00000394299 FAM60AQ9NP50 221 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 ZNF226Q9NYT6 803 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 KCND3Q9UK17 655 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 NAALAD2Q9Y3Q0 740 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 SPTBP11277 2137 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 TMEM247A6NEH6 219 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 B4DGG1 531 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 LDB3O75112 727 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 CDK4P11802 303 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 SOX18P35713 384 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 BUD31P41223 144 aaPredicted RBP14.17□□□□□ -0.14
GPC3-202ENST00000394299 CHRNEQ04844 493 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 PTGES3Q15185 160 aaKnown RBP14.17□□□□□ -0.14
GPC3-202ENST00000394299 FKBP10Q96AY3 582 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 TWSG1Q9GZX9 223 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 SCN3BQ9NY72 215 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 POFUT2Q9Y2G5 429 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 HSPE1-MOB4S4R3N1 261 aa14.17□□□□□ -0.14
GPC3-202ENST00000394299 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 A0A1W2PPC4 97 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 EMC8O43402 210 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 FCMRO60667 390 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 SERPINB7O75635 380 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 SOX14O95416 240 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 FHP07954 510 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 ATXN8OSP0DMR3 200 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 GLULP15104 373 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 C21orf33P30042 268 aaPredicted RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 TTKP33981 857 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms