RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SGK494L7N484 410 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 ENTPD6O75354 484 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 PRR35P0CG20 571 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 SELENOWP63302 87 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 SF3B4Q15427 424 aaKnown RBP eCLIP11.06□□□□□ -0.643e-6■■■□□ 15.9
DDR1-227ENST00000376570 SHISA5Q8N114 240 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 CADM3Q8N126 398 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 NUP43Q8NFH3 380 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 NLGN4YQ8NFZ3 816 aaPredicted RBP11.06□□□□□ -0.64
DDR1-227ENST00000376570 OR51G2Q8NGK0 314 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 TRUB1Q8WWH5 349 aaKnown RBP11.06□□□□□ -0.64
DDR1-227ENST00000376570 ZNF514Q96K75 400 aaPredicted RBP11.06□□□□□ -0.64
DDR1-227ENST00000376570 BTBD1Q9H0C5 482 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 C3orf14Q9HBI5 128 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 RPS6KB2Q9UBS0 482 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 HCN4Q9Y3Q4 1203 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 VWA8A3KMH1 1905 aa11.06□□□□□ -0.64
DDR1-227ENST00000376570 GPR37L1O60883 481 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 BLVRAP53004 296 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 ANKRD54Q6NXT1 300 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 PRR22Q8IZ63 422 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 ANKRD53Q8N9V6 530 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 OR4K5Q8NGD3 323 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 HDAC2Q92769 488 aaKnown RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 LRR1Q96L50 414 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 TEX12Q9BXU0 123 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 TUBA8Q9NY65 449 aaPredicted RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 NDUFAF4Q9P032 175 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 TAAR2Q9P1P5 351 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 TBC1D29Q9UFV1 150 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CORO2BQ9UQ03 480 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 KCNE3Q9Y6H6 103 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 SPACA6W5XKT8 324 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CHD5Q8TDI0 1954 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 ZC3H12DA2A288 527 aaKnown RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 PTHP01270 115 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 HLA-DQA2P01906 255 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 TMBIM6P55061 237 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CHRNEQ04844 493 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 ILF2Q12905 390 aaKnown RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 COL4A6Q14031 1691 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CDKN3Q16667 212 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 C22orf42Q6IC83 251 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 FAM131AQ6UXB0 335 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 ZNF438Q7Z4V0 828 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 AMIGO1Q86WK6 493 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 ZNF433Q8N7K0 673 aaPredicted RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 L3MBTL4Q8NA19 623 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 OR6K6Q8NGW6 343 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 S100ZQ8WXG8 99 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 ZNF707Q96C28 371 aaPredicted RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 ZNF300Q96RE9 604 aaPredicted RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 MAPKAP1Q9BPZ7 522 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 TTYH2Q9BSA4 534 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 UCK2Q9BZX2 261 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 TCEAL2Q9H3H9 227 aaPredicted RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 PNO1Q9NRX1 252 aaKnown RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 A0A1B0GVT2 93 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CCRL2O00421 344 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CTDSP2O14595 271 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CDRT1O95170 752 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 EGFP01133 1207 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 OPN1LWP04000 364 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 FURINP09958 794 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CPMP14384 443 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 CELP19835 753 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 AQP6Q13520 282 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 ZNF267Q14586 743 aaPredicted RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 COQ5Q5HYK3 327 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 RBM48Q5RL73 367 aaKnown RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 PDZK1Q5T2W1 519 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 GTF2IRD2BQ6EKJ0 949 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 OR4C11Q6IEV9 310 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 TECPR1Q7Z6L1 1165 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 GTF2IRD2Q86UP8 949 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 DEPDC4Q8N2C3 294 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 B3GNT7Q8NFL0 401 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 FATE1Q969F0 183 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 RBM18Q96H35 190 aaKnown RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 PEX11GQ96HA9 241 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 DIRAS2Q96HU8 199 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 MCHR1Q99705 422 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 IFT27Q9BW83 186 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 GORASP2Q9H8Y8 452 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 BRD7Q9NPI1 651 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 SLC35C2Q9NQQ7 365 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 YBX2Q9Y2T7 364 aaKnown RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 YARS2Q9Y2Z4 477 aaKnown RBP11.05□□□□□ -0.64
DDR1-227ENST00000376570 WDR45Q9Y484 360 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
DDR1-227ENST00000376570 FGF19O95750 216 aa11.04□□□□□ -0.64
DDR1-227ENST00000376570 MPIP34949 423 aa11.04□□□□□ -0.64
DDR1-227ENST00000376570 CSRP3P50461 194 aa11.04□□□□□ -0.64
DDR1-227ENST00000376570 RAB28P51157 221 aa11.04□□□□□ -0.64
DDR1-227ENST00000376570 FOXL2P58012 376 aa11.04□□□□□ -0.64
DDR1-227ENST00000376570 SLC3A1Q07837 685 aa11.04□□□□□ -0.64
DDR1-227ENST00000376570 GRSF1Q12849 480 aaKnown RBP eCLIP11.04□□□□□ -0.641e-5■□□□□ 8.9
DDR1-227ENST00000376570 MAD2L1BPQ15013 274 aaPredicted RBP11.04□□□□□ -0.64
DDR1-227ENST00000376570 PIP5KL1Q5T9C9 394 aa11.04□□□□□ -0.64
DDR1-227ENST00000376570 SHQ1Q6PI26 577 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms