RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SLC10A1Q14973 349 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 ELAVL1Q15717 326 aaKnown RBP12.09□□□□□ -0.47
CLCN6-205ENST00000376492 HYAL4Q2M3T9 481 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 CCDC153Q494R4 210 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 TRIM40Q6P9F5 258 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 CHSY3Q70JA7 882 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 CAMKMTQ7Z624 323 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 UBE3DQ7Z6J8 389 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 KRTAP1-3Q8IUG1 177 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 GOLM1Q8NBJ4 401 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 PTPMT1Q8WUK0 201 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-205ENST00000376492 SARAFQ96BY9 339 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 REPS1Q96D71 796 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 CMTM7Q96FZ5 175 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 APOPT1Q96IL0 206 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 F2RL3Q96RI0 385 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 MS4A8Q9BY19 250 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 OR8D2Q9GZM6 311 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 ZBTB26Q9HCK0 441 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 SACM1LQ9NTJ5 587 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 B4GALT7Q9UBV7 327 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 MID2Q9UJV3 735 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 RNF11Q9Y3C5 154 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 ATG4BQ9Y4P1 393 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 CLCA3PQ9Y6N3 262 aa12.09□□□□□ -0.47
CLCN6-205ENST00000376492 FN1P02751 2386 aaKnown RBP12.09□□□□□ -0.47
CLCN6-205ENST00000376492 FAM47E-STBD1D6RA91 191 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 FOXE1O00358 373 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-205ENST00000376492 SYT5O00445 386 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 CYR61O00622 381 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 B3GALT2O43825 422 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 DLX3O60479 287 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 CLDN9O95484 217 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 TGFB1P01137 390 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 P04436 131 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 RFPL3SP0C7P2 107 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 PCNAP12004 261 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 ATP5F1P24539 256 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-205ENST00000376492 CERS1P27544 350 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 ARFIP1P53367 373 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 MTTPP55157 894 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 HERVK_113P63132 956 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 RNF4P78317 190 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 CPSF6Q16630 551 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLCN6-205ENST00000376492 DEPDC1Q5TB30 811 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 TMEM198Q66K66 360 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 MYLK4Q86YV6 388 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-205ENST00000376492 ULK2Q8IYT8 1036 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 TMEM132CQ8N3T6 1108 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 OR52B6Q8NGF0 335 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 WDR20Q8TBZ3 569 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 SLC2A12Q8TD20 617 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF483Q8TF39 744 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-205ENST00000376492 FAM222BQ8WU58 562 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 ATP6V1E2Q96A05 226 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 C18orf12Q96KH6 178 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 SGCZQ96LD1 299 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 NSUN5Q96P11 429 aaKnown RBP12.08□□□□□ -0.48
CLCN6-205ENST00000376492 KCNC2Q96PR1 638 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 SERINC2Q96SA4 455 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 TBCDQ9BTW9 1192 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 ERVK-6Q9BXR3 956 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 ROGDIQ9GZN7 287 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 SLC6A15Q9H2J7 730 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 CCDC134Q9H6E4 229 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF703Q9H7S9 590 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-205ENST00000376492 NKIRAS1Q9NYS0 192 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 JMJD1CQ15652 2540 aa12.08□□□□□ -0.48
CLCN6-205ENST00000376492 LRRC3CA6NJW4 275 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 C17orf105B2RV13 164 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 COPEO14579 308 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 HCN1O60741 890 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 SCELO95171 688 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 GABRA1P14867 456 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 IMPDH1P20839 514 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 PTX3P26022 381 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 ADSLP30566 484 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 ASCL1P50553 236 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 CCNG1P51959 295 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 PRKAA2P54646 552 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 LIM2P55344 173 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 ID2Q02363 134 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 TRAF3Q13114 568 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 KEAP1Q14145 624 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 GGTA1PQ4G0N0 100 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 UNC50Q53HI1 259 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF678Q5SXM1 525 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 C10orf62Q5T681 223 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 PRAMEF20Q5VT98 475 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 KHDRBS2Q5VWX1 349 aaKnown RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 FBXW10Q5XX13 1052 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 CLEC9AQ6UXN8 241 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 MILR1Q7Z6M3 343 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 SLC22A9Q8IVM8 553 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF595Q8IYB9 648 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 MORN4Q8NDC4 146 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 TNIP2Q8NFZ5 429 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 OR14A16Q8NHC5 309 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 RAB3IL1Q8TBN0 382 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms