RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 COL9A1P20849 921 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 DCKP27707 260 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 PCBP3P57721 371 aaKnown RBP7.78□□□□□ -1.16
UBR4-202ENST00000375224 VBP1P61758 197 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 CSNK2BP67870 215 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 GALK2Q01415 458 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 PMS2P3Q13401 168 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 RAB39AQ14964 217 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 LRIT3Q3SXY7 679 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 ENPP7Q6UWV6 458 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 CEACAM20Q6UY09 585 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 PSMA8Q8TAA3 256 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 LHFPL5Q8TAF8 219 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 KCNC2Q96PR1 638 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 ZNF300Q96RE9 604 aaPredicted RBP7.78□□□□□ -1.16
UBR4-202ENST00000375224 SLA2Q9H6Q3 261 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 PRDM8Q9NQV8 689 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 ACSL6Q9UKU0 697 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 HCN4Q9Y3Q4 1203 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 PIAS3Q9Y6X2 628 aa7.78□□□□□ -1.16
UBR4-202ENST00000375224 TOR1BO14657 336 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 NTSP30990 170 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 PRKAR1BP31321 381 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 YAP1P46937 504 aaKnown RBP7.77□□□□□ -1.16
UBR4-202ENST00000375224 CRYBA2P53672 197 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 MAPK10P53779 464 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 STXBP1P61764 594 aaKnown RBP7.77□□□□□ -1.16
UBR4-202ENST00000375224 YPEL5P62699 121 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 RACK1P63244 317 aaKnown RBP7.77□□□□□ -1.16
UBR4-202ENST00000375224 CDK5R2Q13319 367 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 SNTA1Q13424 505 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 LRRC32Q14392 662 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 PRSS53Q2L4Q9 553 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 ADPRMQ3LIE5 342 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 FBXO43Q4G163 708 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 BHLHB9Q6PI77 547 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 GALNT5Q7Z7M9 940 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 OR2L3Q8NG85 312 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 DNASE1L2Q92874 299 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 EXOSC8Q96B26 276 aaKnown RBP7.77□□□□□ -1.16
UBR4-202ENST00000375224 MYOCQ99972 504 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 ERVMER34-1Q9H9K5 563 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 CPNE5Q9HCH3 593 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 FGF22Q9HCT0 170 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 FZD3Q9NPG1 666 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 LHX9Q9NQ69 397 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 SLC39A1Q9NY26 324 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 NDUFAF4Q9P032 175 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 PLEKHM1Q9Y4G2 1056 aa7.77□□□□□ -1.16
UBR4-202ENST00000375224 OR52A4PA6NMU1 304 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 SLC1A7O00341 560 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 LATO43561 262 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 ANGPTL1O95841 491 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 INHBBP09529 407 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 IL7RP16871 459 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 BTF3P20290 206 aaKnown RBP7.77□□□□□ -1.17
UBR4-202ENST00000375224 HNRNPA2B1P22626 353 aaKnown RBP7.77□□□□□ -1.17
UBR4-202ENST00000375224 S100A12P80511 92 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 DLX2Q07687 328 aaPredicted RBP7.77□□□□□ -1.17
UBR4-202ENST00000375224 CDK10Q15131 360 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 NEDD8Q15843 81 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 ANKRD34AQ69YU3 496 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 C6orf120Q7Z4R8 191 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 UBE3DQ7Z6J8 389 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 MFSD9Q8NBP5 474 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 OR2L5Q8NG80 312 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 LCN9Q8WX39 176 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 MOAP1Q96BY2 351 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 ZNF607Q96SK3 696 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 DOK1Q99704 481 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 DPH7Q9BTV6 452 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 SLC6A17Q9H1V8 727 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 CCNB1IP1Q9NPC3 277 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 SEMA3GQ9NS98 782 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 EXD2Q9NVH0 621 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 PCOLCE2Q9UKZ9 415 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 NDRG4Q9ULP0 352 aaKnown RBP7.77□□□□□ -1.17
UBR4-202ENST00000375224 ATG2BQ96BY7 2078 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 CHD7Q9P2D1 2997 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 IGKV1-8A0A0C4DH67 115 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 A0A1W2PRG6 482 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 ISM1B1AKI9 464 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 SHOXO15266 292 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 TMPRSS11DO60235 418 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 MITFO75030 526 aaPredicted RBP7.77□□□□□ -1.17
UBR4-202ENST00000375224 RHCEP18577 417 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 AKT2P31751 481 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 BCL6P41182 706 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 CCT3P49368 545 aaKnown RBP7.77□□□□□ -1.17
UBR4-202ENST00000375224 AKR1D1P51857 326 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 PLA2G16P53816 162 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 TMBIM6P55061 237 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 PPP2CBP62714 309 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 PPP2CAP67775 309 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 SPIBQ01892 262 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 FAPQ12884 760 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 NPRL3Q12980 569 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 RAPSNQ13702 412 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 SIM2Q14190 667 aaPredicted RBP7.77□□□□□ -1.17
UBR4-202ENST00000375224 Q3ZCU0 254 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms