RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ATRXP46100 2492 aa14.84□□□□□ -0.03
PFDN4-201ENST00000371419 CROCCQ5TZA2 2017 aa14.84□□□□□ -0.03
PFDN4-201ENST00000371419 TLN1Q9Y490 2541 aaKnown RBP14.84□□□□□ -0.03
PFDN4-201ENST00000371419 A8MUI8 341 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 TBX19O60806 448 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 DDX5P17844 614 aaKnown RBP14.83□□□□□ -0.03
PFDN4-201ENST00000371419 NT5EP21589 574 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 RPL3P39023 403 aaKnown RBP14.83□□□□□ -0.03
PFDN4-201ENST00000371419 DIO3P55073 304 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 PDE7AQ13946 482 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 CEBPEQ15744 281 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 CRB2Q5IJ48 1285 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 C6orf163Q5TEZ5 329 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 TCTN3Q6NUS6 607 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 R3HCC1LQ7Z5L2 792 aaKnown RBP14.83□□□□□ -0.03
PFDN4-201ENST00000371419 SPATA19Q7Z5L4 167 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 GALNT12Q8IXK2 581 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 FAM9CQ8IZT9 166 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 SIRT6Q8N6T7 355 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 LSM14AQ8ND56 463 aaKnown RBP14.83□□□□□ -0.03
PFDN4-201ENST00000371419 RBM15BQ8NDT2 890 aaKnown RBP14.83□□□□□ -0.03
PFDN4-201ENST00000371419 OR1N1Q8NGS0 311 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 PPCDCQ96CD2 204 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 SENP5Q96HI0 755 aaPredicted RBP14.83□□□□□ -0.03
PFDN4-201ENST00000371419 FBXL20Q96IG2 436 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 BBS4Q96RK4 519 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 SMAD5Q99717 465 aaKnown RBP14.83□□□□□ -0.03
PFDN4-201ENST00000371419 CNPPD1Q9BV87 410 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 SEMA4CQ9C0C4 833 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 PTGFRNQ9P2B2 879 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 COPS7AQ9UBW8 275 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 PCDHGB7Q9Y5F8 929 aa14.83□□□□□ -0.03
PFDN4-201ENST00000371419 FAM208BQ5VWN6 2430 aa14.83□□□□□ -0.04
PFDN4-201ENST00000371419 TRBV11-1A0A0K0K1C0 115 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ATXN7O15265 892 aaPredicted RBP14.82□□□□□ -0.04
PFDN4-201ENST00000371419 PRPS1L1P21108 318 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 MPIP34949 423 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 CLDN8P56748 225 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 DUSP2Q05923 314 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 LY6DQ14210 128 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ZNF267Q14586 743 aaPredicted RBP14.82□□□□□ -0.04
PFDN4-201ENST00000371419 MAPRE2Q15555 327 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 PRSS53Q2L4Q9 553 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ANKRD26P1Q6NSI1 321 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 H3F3CQ6NXT2 135 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ISLR2Q6UXK2 745 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 CCDC116Q8IYX3 515 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 SLC5A8Q8N695 610 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ZNF721Q8TF20 911 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 DEFB126Q9BYW3 111 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 SH3BP4Q9P0V3 963 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ATP6V1HQ9UI12 483 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 TEKT2Q9UIF3 430 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 TP53TG5Q9Y2B4 290 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ZNF451Q9Y4E5 1061 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 GABRR3A8MPY1 467 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 MYO1GB0I1T2 1018 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 HRKO00198 91 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 SCAMP2O15127 329 aaKnown RBP14.82□□□□□ -0.04
PFDN4-201ENST00000371419 UBDO15205 165 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ZFAND5O76080 213 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 IGKV3-11P04433 115 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 PCSK2P16519 638 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 NTSP30990 170 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 SOX11P35716 441 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ATP4BP51164 291 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 MAP4K2Q12851 820 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 SQLEQ14534 574 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 PRICKLE4Q2TBC4 344 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 HSDL2Q6YN16 418 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ZNF321PQ8N8H1 164 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 DOK4Q8TEW6 326 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ZNF354BQ96LW1 612 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 BRINP2Q9C0B6 783 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ZNF71Q9NQZ8 489 aaPredicted RBP14.82□□□□□ -0.04
PFDN4-201ENST00000371419 NDE1Q9NXR1 346 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ZNF223Q9UK11 482 aaPredicted RBP14.82□□□□□ -0.04
PFDN4-201ENST00000371419 MAPRE3Q9UPY8 281 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 ERVK-19Q9WJR5 959 aa14.82□□□□□ -0.04
PFDN4-201ENST00000371419 BOD1L1Q8NFC6 3051 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 K7EM74 188 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 PDPK1O15530 556 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 CIB2O75838 187 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 PDGFAP04085 211 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 ALDOCP09972 364 aaKnown RBP14.81□□□□□ -0.04
PFDN4-201ENST00000371419 CT62P0C5K7 136 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 CPOXP36551 454 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 NCBP2P52298 156 aaKnown RBP eCLIP14.81□□□□□ -0.043e-6■■■■□ 21.7
PFDN4-201ENST00000371419 C21orf58P58505 322 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 MFAP5Q13361 173 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 CYLC2Q14093 348 aaPredicted RBP14.81□□□□□ -0.04
PFDN4-201ENST00000371419 ABHD17BQ5VST6 288 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 B3GNTL1Q67FW5 361 aaPredicted RBP14.81□□□□□ -0.04
PFDN4-201ENST00000371419 LINC00696Q6ZRV3 163 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 ASB18Q6ZVZ8 466 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 HPS6Q86YV9 775 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 RIMKLAQ8IXN7 391 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 VWA5B2Q8N398 1253 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 KRTCAP2Q8N6L1 136 aa14.81□□□□□ -0.04
PFDN4-201ENST00000371419 POU5F2Q8N7G0 328 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms