RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 BLOC1S3Q6QNY0 202 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 ZNF761Q86XN6 746 aaPredicted RBP21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 PREBQ9HCU5 417 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 ZNF850A8MQ14 1090 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 NOTOA8MTQ0 251 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 GBX1Q14549 363 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 CST6Q15828 149 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 C6orf89Q6UWU4 347 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 ZER1Q7Z7L7 766 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 KATNBL1Q9H079 304 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 NDUFV2P19404 249 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 RIDAP52758 137 aaKnown RBP21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 SLC45A3Q96JT2 553 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 CNN2Q99439 309 aaKnown RBP21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 CPNE6O95741 557 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 HNRNPA1P09651 372 aaKnown RBP eCLIP21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 GNMTQ14749 295 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 TP63Q9H3D4 680 aaPredicted RBP21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 B4GALT7Q9UBV7 327 aa21.13■□□□□ 0.97
TM9SF3-201ENST00000371142 IFNA2P01563 188 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 POU3F4P49335 361 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 EFR3AQ14156 821 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 LRRN1Q6UXK5 716 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 NPWQ8N729 165 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 MAL2Q969L2 176 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 HS6ST2Q96MM7 605 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 OR2S2Q9NQN1 319 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 TOXO94900 526 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 SOX30O94993 753 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 CTBP2P56545 445 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 TAS2R38P59533 333 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 ZNF296Q8WUU4 475 aaPredicted RBP21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 MGLLQ99685 303 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 PITX2Q99697 317 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 SDC3O75056 442 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 GSTM2P28161 218 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 CEACAM7Q14002 265 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 CICQ96RK0 1608 aaPredicted RBP21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 MYADML2A6NDP7 307 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 DRD2P14416 443 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 FASLGP48023 281 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 MOGSQ13724 837 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 PON2Q15165 354 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 HDHD5Q9BXW7 423 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 POU2F3Q9UKI9 436 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 FOXD2O60548 495 aaPredicted RBP21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 IL1RNP18510 177 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 CFL1P23528 166 aaKnown RBP21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 POU4F2Q12837 409 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 USF2Q15853 346 aaPredicted RBP21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 SHFQ7M4L6 423 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 TBC1D15Q8TC07 691 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 IL20RAQ9UHF4 553 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 ACTL7AQ9Y615 435 aa21.12■□□□□ 0.97
TM9SF3-201ENST00000371142 GXYLT2A0PJZ3 443 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 E7ESA3 106 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 APOFQ13790 326 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 ATAD3CQ5T2N8 411 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 LEG1Q6P5S2 330 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 TMEM135Q86UB9 458 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 CREB3L4Q8TEY5 395 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 NAA11Q9BSU3 229 aaPredicted RBP21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 URM1Q9BTM9 101 aaKnown RBP21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 SPEF2Q9C093 1822 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 HRGP04196 525 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 DLX2Q07687 328 aaPredicted RBP21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 OR8J1Q8NGP2 316 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 C16orf78Q8WTQ4 265 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 TNFRSF1BP20333 461 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 MAP2K3P46734 347 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 SPINT3P49223 89 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 ACTA2P62736 377 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 ACTG2P63267 376 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 TMEM68Q96MH6 324 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 SYT4Q9H2B2 425 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 ERVK13-1Q9NX77 482 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 GPR83Q9NYM4 423 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 KLHL21Q9UJP4 597 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 H2AFB2P0C5Z0 115 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 SH3BP2P78314 561 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 SPHARQ15513 63 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 GRHL2Q6ISB3 625 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 ARHGAP11AQ6P4F7 1023 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 MINDY1Q8N5J2 469 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 ZNF559Q9BR84 538 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 CREBZFQ9NS37 354 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 MGAT4CQ9UBM8 478 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 STUB1Q9UNE7 303 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 KAT6AQ92794 2004 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 BORCS7-ASMTA0A0B4J1R7 106 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 AGAP5A6NIR3 686 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 SLC22A31A6NKX4 558 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 CLDN8P56748 225 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 DEFB110Q30KQ9 67 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 TMEM35AQ53FP2 167 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 KLHDC8AQ8IYD2 350 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 OR4K13Q8NH42 304 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 RPLP0P6Q8NHW5 317 aa21.11■□□□□ 0.97
TM9SF3-201ENST00000371142 SRYQ05066 204 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms