RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 MECRQ9BV79 373 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 TMEM109Q9BVC6 243 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 BRINP2Q9C0B6 783 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 IQCGQ9H095 443 aaKnown RBP13.35□□□□□ -0.27
SSR4-203ENST00000370086 SACM1LQ9NTJ5 587 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 MAT2BQ9NZL9 334 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 ZNF639Q9UID6 485 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 TINAGQ9UJW2 476 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 UTS2RQ9UKP6 389 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 RAB21Q9UL25 225 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 PSME2Q9UL46 239 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 DTX4Q9Y2E6 619 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 ZNF780BQ9Y6R6 833 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 DOPEY1Q5JWR5 2465 aa13.35□□□□□ -0.27
SSR4-203ENST00000370086 SPTBN1Q01082 2364 aaKnown RBP13.35□□□□□ -0.27
SSR4-203ENST00000370086 CCL21O00585 134 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 P04436 131 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 ANXA4P09525 319 aaPredicted RBP13.34□□□□□ -0.27
SSR4-203ENST00000370086 FBXO45P0C2W1 286 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 DNASE1L1P49184 302 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 PER3P56645 1201 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 PPIAP62937 165 aaKnown RBP13.34□□□□□ -0.27
SSR4-203ENST00000370086 EXOSC7Q15024 291 aaKnown RBP13.34□□□□□ -0.27
SSR4-203ENST00000370086 IMPG1Q17R60 797 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 PRSS53Q2L4Q9 553 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 TMEM64Q6YI46 380 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 BNC2Q6ZN30 1099 aaPredicted RBP13.34□□□□□ -0.27
SSR4-203ENST00000370086 MAMDC2Q7Z304 686 aaPredicted RBP13.34□□□□□ -0.27
SSR4-203ENST00000370086 CCDC116Q8IYX3 515 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 VWA5B2Q8N398 1253 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 OR7G1Q8NGA0 311 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 PAQR8Q8TEZ7 354 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 TP53INP1Q96A56 240 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 CTHRC1Q96CG8 243 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 SPACA9Q96E40 222 aaPredicted RBP13.34□□□□□ -0.27
SSR4-203ENST00000370086 MAGED4Q96JG8 741 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 FAM173AQ9BQD7 235 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 TTTY12Q9BZ98 90 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 DEFB127Q9H1M4 99 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 PTGDR2Q9Y5Y4 395 aa13.34□□□□□ -0.27
SSR4-203ENST00000370086 NCOA6Q14686 2063 aaPredicted RBP13.34□□□□□ -0.27
SSR4-203ENST00000370086 ZNF407Q9C0G0 2248 aa13.33□□□□□ -0.27
SSR4-203ENST00000370086 FREM3P0C091 2139 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 A0A1B0GTH9 108 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 FAM166BA8MTA8 275 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 AZIN1O14977 448 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 CDC40O60508 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR4-203ENST00000370086 PDE9AO76083 593 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 GLSO94925 669 aaPredicted RBP13.33□□□□□ -0.28
SSR4-203ENST00000370086 CBX7O95931 251 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 CHRNGP07510 517 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 GPX3P22352 226 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 COL8A1P27658 744 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 PIGAP37287 484 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 PLGLB1Q02325 96 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 ZNF844Q08AG5 666 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 ZNF763Q0D2J5 394 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 FOXO1Q12778 655 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 HEPACAMQ14CZ8 416 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 TRMT12Q53H54 448 aaKnown RBP13.33□□□□□ -0.28
SSR4-203ENST00000370086 SLC22A10Q63ZE4 541 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 GK5Q6ZS86 529 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 FAM47EQ6ZV65 393 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 LRRC25Q8N386 305 aaPredicted RBP13.33□□□□□ -0.28
SSR4-203ENST00000370086 OR10G3Q8NGC4 313 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR4-203ENST00000370086 EXOSC8Q96B26 276 aaKnown RBP13.33□□□□□ -0.28
SSR4-203ENST00000370086 CCDC120Q96HB5 630 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 SMC6Q96SB8 1091 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 TUBB1Q9H4B7 451 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 ANKRA2Q9H9E1 313 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 PROK2Q9HC23 129 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 RRAGDQ9NQL2 400 aaPredicted RBP13.33□□□□□ -0.28
SSR4-203ENST00000370086 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 TUBA8Q9NY65 449 aaPredicted RBP13.33□□□□□ -0.28
SSR4-203ENST00000370086 BCAP29Q9UHQ4 241 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 FIS1Q9Y3D6 152 aa13.33□□□□□ -0.28
SSR4-203ENST00000370086 POLR3HQ9Y535 204 aaPredicted RBP13.33□□□□□ -0.28
SSR4-203ENST00000370086 CHCHD2Q9Y6H1 151 aaPredicted RBP13.33□□□□□ -0.28
SSR4-203ENST00000370086 TYROBPO43914 113 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 NPHS1O60500 1241 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 RSL1D1O76021 490 aaKnown RBP13.32□□□□□ -0.28
SSR4-203ENST00000370086 LRATO95237 230 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 ABOP16442 354 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 PCSK2P16519 638 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 PRPH2P23942 346 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 GSTM5P46439 218 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 CASP6P55212 293 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 MRPS35P82673 323 aaKnown RBP13.32□□□□□ -0.28
SSR4-203ENST00000370086 C2orf80Q0P641 193 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 KIAA0040Q15053 153 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 CEBPEQ15744 281 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 NTRK2Q16620 822 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 ZNF628Q5EBL2 1059 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 PRAMEF20Q5VT98 475 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 HLA-DQA1Q5Y7H0 255 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 KANK2Q63ZY3 851 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 NOXRED1Q6NXP6 359 aa13.32□□□□□ -0.28
SSR4-203ENST00000370086 Q6ZSR9 355 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms