RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 SRFBP1Q8NEF9 429 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 METTL2AQ96IZ6 378 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SORCS2Q96PQ0 1159 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SMAD5Q99717 465 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SOSTQ9BQB4 213 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SAP130Q9H0E3 1048 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 TMEM38AQ9H6F2 299 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 LIN7BQ9HAP6 207 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 ZDHHC3Q9NYG2 299 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 PTGFRNQ9P2B2 879 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 MRPS7Q9Y2R9 242 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 COL4A4P53420 1690 aaPredicted RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 A0A1W2PRB8 838 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 HNRNPCL2B2RXH8 293 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 NPIPB8E9PQR5 432 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 FAAHO00519 579 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SLC9A3R1O14745 358 aaPredicted RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 B4GALT3O60512 393 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SOD1P00441 154 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 HLA-DPB1P04440 258 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 ELOAQ14241 798 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 LGALSLQ3ZCW2 172 aaPredicted RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 CFAP77Q6ZQR2 320 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SZRD1Q7Z422 152 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 RAB8BQ92930 207 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 BHLHE41Q9C0J9 482 aaPredicted RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 DPAGT1Q9H3H5 408 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SERHL2Q9H4I8 314 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 HEXA-AS1Q9H8Q6 139 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 MBD1Q9UIS9 605 aaPredicted RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SF3B6Q9Y3B4 125 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 A0A0U1RQF3 1178 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 ARRDC5A6NEK1 342 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 M0R233 179 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 CFDP00746 253 aaPredicted RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 ARAFP10398 606 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 KCNC3Q14003 757 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 C3orf38Q5JPI3 329 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 TMEM81Q6P7N7 255 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 TMEM107Q6UX40 140 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 SERPINA13PQ6UXR4 307 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 RFLNAQ6ZTI6 216 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 GPALPP1Q8IXQ4 340 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 FAM26EQ8N5C1 309 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 SMG7Q92540 1137 aaKnown RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 NXPE2Q96DL1 559 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 C11orf24Q96F05 449 aaPredicted RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 ART5Q96L15 291 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 IMP3Q9NV31 184 aaKnown RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 NKIRAS2Q9NYR9 191 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 ZFR2Q9UPR6 939 aaKnown RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 PRKAB1Q9Y478 270 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 CACNG2Q9Y698 323 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 A0A1W2PPL8 197 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 GABRPO00591 440 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 SLC19A2O60779 497 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 OAZ2O95190 189 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 MPC2O95563 127 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 KLKB1P03952 638 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 RRASP10301 218 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 GIPRP48546 466 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 CLCNKAP51800 687 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 SPIN4Q56A73 249 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 TCTN3Q6NUS6 607 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 SAMD12Q8N8I0 201 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 OR7G3Q8NG95 312 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 TOE1Q96GM8 510 aaKnown RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 C12orf66Q96MD2 445 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 BRD9Q9H8M2 597 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 PATJQ8NI35 1801 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 UNC80Q8N2C7 3258 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 TRBV5-4A0A0C4DH59 114 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 TRDV1A0A1B0GX56 115 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 RPS10-NUDT3A0A1W2PQS6 291 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 TGFB1P01137 390 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 ZNF8P17098 575 aaPredicted RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 HK1P19367 917 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 GJA5P36382 358 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 MTNR1AP48039 350 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 ZNF763Q0D2J5 394 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 STK11Q15831 433 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 LIPIQ6XZB0 460 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 TMPRSS11BQ86T26 416 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 PLA2G15Q8NCC3 412 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 SLC7A13Q8TCU3 470 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 RAET1EQ8TD07 263 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 ST8SIA4Q92187 359 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 COQ10AQ96MF6 247 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 POLDIP3Q9BY77 421 aaKnown RBP13.63□□□□□ -0.23
PHTF1-204ENST00000369604 MVB12BQ9H7P6 319 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 MIEF1Q9NQG6 463 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 CD84Q9UIB8 345 aa13.63□□□□□ -0.23
PHTF1-204ENST00000369604 SHISA3A0PJX4 238 aa13.62□□□□□ -0.23
PHTF1-204ENST00000369604 ZNF197O14709 1029 aa13.62□□□□□ -0.23
PHTF1-204ENST00000369604 BET1O15155 118 aa13.62□□□□□ -0.23
PHTF1-204ENST00000369604 TBL1XO60907 577 aa13.62□□□□□ -0.23
PHTF1-204ENST00000369604 EPHX1P07099 455 aa13.62□□□□□ -0.23
PHTF1-204ENST00000369604 HOXD4P09016 255 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms