RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 DNAJC13O75165 2243 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 C2orf92A0A1B0GVN3 265 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 TFECO14948 347 aaPredicted RBP17.47■□□□□ 0.39
CKS1B-203ENST00000368439 TRIM13O60858 407 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 SPAG7O75391 227 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 UROSP10746 265 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 DRD2P14416 443 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 ALDH3A1P30838 453 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 DEKP35659 375 aaKnown RBP17.47■□□□□ 0.39
CKS1B-203ENST00000368439 ALDH9A1P49189 494 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 BTKQ06187 659 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 FOXO1Q12778 655 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 CEBPEQ15744 281 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 MAMDC2Q7Z304 686 aaPredicted RBP17.47■□□□□ 0.39
CKS1B-203ENST00000368439 SIMC1Q8NDZ2 872 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.47■□□□□ 0.395e-12■□□□□ 8.1
CKS1B-203ENST00000368439 FAM111AQ96PZ2 611 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 FAM173AQ9BQD7 235 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 EBPLQ9BY08 206 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 PROK2Q9HC23 129 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 SACM1LQ9NTJ5 587 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 TINAGQ9UJW2 476 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 UTS2RQ9UKP6 389 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 PSME2Q9UL46 239 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 DTX4Q9Y2E6 619 aa17.47■□□□□ 0.39
CKS1B-203ENST00000368439 CHCHD2Q9Y6H1 151 aaPredicted RBP17.47■□□□□ 0.39
CKS1B-203ENST00000368439 GNG14A0A1W2PPG7 69 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 NPIPB8E9PQR5 432 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 CCL21O00585 134 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 CBX7O95931 251 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 GPX3P22352 226 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 KIAA0040Q15053 153 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 LTB4RQ15722 352 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 NTRK2Q16620 822 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 PRSS53Q2L4Q9 553 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 HYAL4Q2M3T9 481 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 CLEC6AQ6EIG7 209 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 DND1Q8IYX4 353 aaKnown RBP17.46■□□□□ 0.39
CKS1B-203ENST00000368439 VWA5B2Q8N398 1253 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 TCP10LQ8TDR4 215 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 CCDC120Q96HB5 630 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 MAGED4Q96JG8 741 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 TTTY12Q9BZ98 90 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 ZDHHC11Q9H8X9 412 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 SH3BGRL2Q9UJC5 107 aa17.46■□□□□ 0.39
CKS1B-203ENST00000368439 TYROBPO43914 113 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 RSL1D1O76021 490 aaKnown RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 ANXA4P09525 319 aaPredicted RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 PRPH2P23942 346 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 PIGAP37287 484 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 GSTM5P46439 218 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 DNASE1L1P49184 302 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 PPIAP62937 165 aaKnown RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 ZNF844Q08AG5 666 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 TRMT12Q53H54 448 aaKnown RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 ZNF628Q5EBL2 1059 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 SLC22A10Q63ZE4 541 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 TMEM64Q6YI46 380 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 RNF165Q6ZSG1 346 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 LRRC25Q8N386 305 aaPredicted RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 C17orf47Q8NEP4 570 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 ADCY4Q8NFM4 1077 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 OR10G3Q8NGC4 313 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 TRMOQ9BU70 441 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 MECRQ9BV79 373 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 BRINP2Q9C0B6 783 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 IQCGQ9H095 443 aaKnown RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 TUBB1Q9H4B7 451 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 TUBA8Q9NY65 449 aaPredicted RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 CNOT11Q9UKZ1 510 aaKnown RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 EXO1Q9UQ84 846 aaKnown RBP17.45■□□□□ 0.38
CKS1B-203ENST00000368439 PTGDR2Q9Y5Y4 395 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 ZNF780BQ9Y6R6 833 aa17.45■□□□□ 0.38
CKS1B-203ENST00000368439 UNC79Q9P2D8 2635 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 A0A1B0GTH9 108 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 FAM166BA8MTA8 275 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 AZIN1O14977 448 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 CRCPO75575 148 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 P04436 131 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 COL8A1P27658 744 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 MRPS35P82673 323 aaKnown RBP17.44■□□□□ 0.38
CKS1B-203ENST00000368439 ZNF763Q0D2J5 394 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 HEPACAMQ14CZ8 416 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 EXOSC7Q15024 291 aaKnown RBP17.44■□□□□ 0.38
CKS1B-203ENST00000368439 SPDYAQ5MJ70 313 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 KANK2Q63ZY3 851 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 FAM71E1Q6IPT2 247 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 RGS9BPQ6ZS82 235 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 GK5Q6ZS86 529 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 Q6ZSR9 355 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 FAM47EQ6ZV65 393 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 DOLPP1Q86YN1 238 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 CCDC116Q8IYX3 515 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 TAGAPQ8N103 731 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 FBXW8Q8N3Y1 598 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 TMEM251Q8N6I4 163 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 OR2T11Q8NH01 316 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 FAM76AQ8TAV0 307 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 ZNF675Q8TD23 568 aa17.44■□□□□ 0.38
CKS1B-203ENST00000368439 ITLN2Q8WWU7 325 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms