RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SNHG28P0DPA3 235 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 SHC2P98077 582 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 MLC1Q15049 377 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 PGAP1Q75T13 922 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 DPPA2Q7Z7J5 298 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 ZFP82Q8N141 532 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 FRZBQ92765 325 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 SLC7A6OSQ96CW6 309 aaPredicted RBP6.77□□□□□ -1.33
SPTA1-201ENST00000368147 TCF12Q99081 682 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 OR2B2Q9GZK3 357 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 PRDM9Q9NQV7 894 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 XPNPEP1Q9NQW7 623 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 SUSD2Q9UGT4 822 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 SVILO95425 2214 aa6.77□□□□□ -1.33
SPTA1-201ENST00000368147 BCL9LQ86UU0 1499 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 UCHL1P09936 223 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 SLC2A2P11168 524 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ETFAP13804 333 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 TNFRSF8P28908 595 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 SLC6A11P48066 632 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 LAPTM4AQ15012 233 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF674Q2M3X9 581 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 IER5LQ5T953 404 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 OR4F6Q8NGB9 312 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 OR2T34Q8NGX1 318 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 OR2T3Q8NH03 318 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 CHTF18Q8WVB6 975 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 IGSF8Q969P0 613 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 SECISBP2Q96T21 854 aaKnown RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 AGXT2Q9BYV1 514 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 PCDHAC1Q9H158 963 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 POLE4Q9NR33 117 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ACSL5Q9ULC5 683 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF888P0CJ79 500 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 GDF1P27539 372 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 GGT2P36268 569 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 POU6F2P78424 691 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 DPY19L4Q7Z388 723 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 OR6N2Q8NGY6 317 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 MACROD1Q9BQ69 325 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 NANSQ9NR45 359 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 DUOX1Q9NRD9 1551 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 HTR3EA5X5Y0 456 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 DUXAA6NLW8 204 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 SEC14L6B5MCN3 397 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF670-ZNF695F2Z2N8 137 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 UNC5CO95185 931 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 GKN3PP0CG01 181 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 RPA4Q13156 261 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 SH3D19Q5HYK7 790 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 EMC10Q5UCC4 262 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 TRNP1Q6NT89 227 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 DCUN1D3Q8IWE4 304 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 AVL9Q8NBF6 648 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 AQP11Q8NBQ7 271 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 NUP43Q8NFH3 380 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 SMPDL3AQ92484 453 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 PITX2Q99697 317 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 NAA11Q9BSU3 229 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 C1orf21Q9H246 121 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 GSKIPQ9P0R6 139 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 PRPF19Q9UMS4 504 aaKnown RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ERVK-19Q9WJR5 959 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 FXYD6-FXYD2A0A087WZ82 144 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 F2P00734 622 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF30P17039 623 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 PGGT1BP53609 377 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 LIMK2P53671 638 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 GPR17Q13304 367 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ABRAXAS2Q15018 415 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 TMEM214Q6NUQ4 689 aaKnown RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 SLC39A4Q6P5W5 647 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 TSPAN33Q86UF1 283 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 TRABD2AQ86V40 505 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 FUKQ8N0W3 1084 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 VRK1Q99986 396 aaPredicted RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 HINT2Q9BX68 163 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 FXYD6Q9H0Q3 95 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ANKRD10Q9NXR5 420 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 YTHDF2Q9Y5A9 579 aaKnown RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 FADS3Q9Y5Q0 445 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 DDX60Q8IY21 1712 aaKnown RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 MEIS3P2A8K0S8 358 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 EEF1E1-BLOC1S5C9J1V9 151 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 EEF1E1O43324 174 aaKnown RBP6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ITM2AO43736 263 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 LYPLA2O95372 231 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ZNF81P51508 661 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 HERVK_113P63132 956 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 DSC1Q08554 894 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 BAMBIQ13145 260 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 LTC4SQ16873 150 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 WSCD2Q2TBF2 565 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 CLLU1OSQ5K130 101 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 DCAF12L1Q5VU92 463 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 FRG2Q64ET8 278 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ATG9BQ674R7 924 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 TXNRD3NBQ6F5E7 133 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 ARL9Q6T311 187 aa6.76□□□□□ -1.33
SPTA1-201ENST00000368147 LIPIQ6XZB0 460 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms