RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 OR12D1P0DN82 309 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 RABIFP47224 123 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 TPMTP51580 245 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 UGT2B15P54855 530 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 SRP54P61011 504 aaKnown RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 OLR1P78380 273 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 GANABQ14697 944 aaKnown RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 ATAD3BQ5T9A4 648 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 ZNF770Q6IQ21 691 aaPredicted RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 FAM180BQ6P0A1 224 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 SLC16A12Q6ZSM3 486 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 AHSA2Q719I0 299 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 TRIM48Q8IWZ4 208 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 ZNF655Q8N720 491 aaPredicted RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 GPR32P1Q8NGA4 272 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 HMGB4Q8WW32 186 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 XAGE5Q8WWM1 108 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 SERINC2Q96SA4 455 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 NIPSNAP1Q9BPW8 284 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 TBC1D23Q9NUY8 699 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 FKBP14Q9NWM8 211 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 CNOT2Q9NZN8 540 aaKnown RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 CES1P1Q9UKY3 287 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 PNMA8BQ9ULN7 279 aaPredicted RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 KLK4Q9Y5K2 254 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 A0A0G2JN53 185 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 A0A1W2PRQ8 180 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 A6NCN8 305 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 EFCAB10A6NFE3 127 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 CLDN24A6NM45 220 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 ZAR1LA6NP61 321 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 J3KTA2 159 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 SYT5O00445 386 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 PCDH17O14917 1159 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 B4GALT2O60909 372 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 SLITRK5O94991 958 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 RECKO95980 971 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 ZNF182P17025 639 aaPredicted RBP13.21□□□□□ -0.3
USF1-202ENST00000368020 CERS1P27544 350 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 PSMB9P28065 219 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 HOXA6P31267 233 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 TLX1P31314 330 aaPredicted RBP13.21□□□□□ -0.3
USF1-202ENST00000368020 IDH2P48735 452 aaKnown RBP13.21□□□□□ -0.3
USF1-202ENST00000368020 CRISP1P54107 249 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 CLDN2P57739 230 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 PIGFQ07326 219 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 COX10Q12887 443 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 DGCR6Q14129 220 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 MANEAQ5SRI9 462 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 ABHD13Q7L211 337 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 ARHGAP22Q7Z5H3 698 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 AMER3Q8N944 861 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 CAMKVQ8NCB2 501 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 FLCNQ8NFG4 579 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 OR9Q2Q8NGE9 314 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 FAM174AQ8TBP5 190 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 TBC1D15Q8TC07 691 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 UTP15Q8TED0 518 aaKnown RBP13.21□□□□□ -0.3
USF1-202ENST00000368020 TRUB1Q8WWH5 349 aaKnown RBP13.21□□□□□ -0.3
USF1-202ENST00000368020 RSC1A1Q92681 617 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 YIPF6Q96EC8 236 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 CRELD1Q96HD1 420 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 BMFQ96LC9 184 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 Q96MT0 163 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 PINK1Q9BXM7 581 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 ITPAQ9BY32 194 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 UCK2Q9BZX2 261 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 POT1Q9NUX5 634 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 RLIMQ9NVW2 624 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 CLN6Q9NWW5 311 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 ZNF624Q9P2J8 865 aaPredicted RBP13.21□□□□□ -0.3
USF1-202ENST00000368020 FBXW2Q9UKT8 454 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 DSPPQ9NZW4 1301 aa13.21□□□□□ -0.3
USF1-202ENST00000368020 PRAMEF26H0Y7S4 382 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 ZNF217O75362 1048 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 BCAS1O75363 584 aaPredicted RBP13.2□□□□□ -0.3
USF1-202ENST00000368020 RASGRP1O95267 797 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 FADS2O95864 444 aaKnown RBP13.2□□□□□ -0.3
USF1-202ENST00000368020 TNFP01375 233 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 CDK1P06493 297 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 OSMP13725 252 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 ELAVL4P26378 380 aaKnown RBP13.2□□□□□ -0.3
USF1-202ENST00000368020 IFNA8P32881 189 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 CTSKP43235 329 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 CXCL12P48061 93 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 CCR5P51681 352 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 LIM2P55344 173 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 OCA2Q04671 838 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 ILKQ13418 452 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 PTGES3Q15185 160 aaKnown RBP13.2□□□□□ -0.3
USF1-202ENST00000368020 MAPK11Q15759 364 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 CTF1Q16619 201 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 TCTN3Q6NUS6 607 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 CCDC81Q6ZN84 652 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 FAM46DQ8NEK8 389 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 CNRIP1Q96F85 164 aaPredicted RBP13.2□□□□□ -0.3
USF1-202ENST00000368020 TRNT1Q96Q11 434 aaKnown RBP13.2□□□□□ -0.3
USF1-202ENST00000368020 GSDMCQ9BYG8 508 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 SERHL2Q9H4I8 314 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 CACYBPQ9HB71 228 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms