RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 IFNEQ86WN2 208 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 WFDC8Q8IUA0 241 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 RDH11Q8TC12 318 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 SMAP2Q8WU79 429 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-202ENST00000367740 ZNF669Q96BR6 464 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-202ENST00000367740 REPS1Q96D71 796 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 BARX1Q9HBU1 254 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-202ENST00000367740 SNX15Q9NRS6 342 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 PRKDCP78527 4128 aaKnown RBP13.2□□□□□ -0.3
VAMP4-202ENST00000367740 ZCWPW2A0A1B0GU75 182 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 C2orf92A0A1B0GVN3 265 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 GRID2IPA4D2P6 1211 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 SSX4O60224 188 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 C1GALT1C1LP0DN25 315 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 IGHV4-31P0DP07 118 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
VAMP4-202ENST00000367740 PCDH1Q08174 1060 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 ZNF267Q14586 743 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-202ENST00000367740 EXOC3L2Q2M3D2 409 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 FAM174BQ3ZCQ3 159 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 SLCO4C1Q6ZQN7 724 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 UBE3DQ7Z6J8 389 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 PRR22Q8IZ63 422 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 BBOF1Q8ND07 529 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 OR10H5Q8NGA6 315 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 C1orf54Q8WWF1 131 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 FIG4Q92562 907 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 NEUROG1Q92886 237 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 RBM18Q96H35 190 aaKnown RBP13.19□□□□□ -0.3
VAMP4-202ENST00000367740 C1orf159Q96HA4 380 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 TRIM54Q9BYV2 358 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 METTL7AQ9H8H3 244 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 ACTR8Q9H981 624 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 GALNT9Q9HCQ5 603 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 PTBP2Q9UKA9 531 aaKnown RBP13.19□□□□□ -0.3
VAMP4-202ENST00000367740 FBXO5Q9UKT4 447 aa13.19□□□□□ -0.3
VAMP4-202ENST00000367740 TCRBV7S3A2A0A539 114 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 CDH16O75309 829 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 TPM3P06753 285 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 TPM1P09493 284 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 DPP4P27487 766 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 HPDP32754 393 aaPredicted RBP13.18□□□□□ -0.3
VAMP4-202ENST00000367740 PTGDSP41222 190 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 KCNC1P48547 511 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 CDKN2DP55273 166 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 SNX1Q13596 522 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 SETDB1Q15047 1291 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 GUSBP1Q15486 140 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 PPP1R3AQ16821 1122 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 PGGHGQ32M88 737 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 FAM120AOSQ5T036 256 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 CYB5R2Q6BCY4 276 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 DESI1Q6ICB0 168 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 STAC2Q6ZMT1 411 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.18□□□□□ -0.3
VAMP4-202ENST00000367740 ACOT4Q8N9L9 421 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 TP53INP1Q96A56 240 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
VAMP4-202ENST00000367740 KCNC2Q96PR1 638 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 F2RL3Q96RI0 385 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 TSGA10Q9BZW7 698 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 TAS2R13Q9NYV9 303 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 IKZF3Q9UKT9 509 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 PROCRQ9UNN8 238 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 RNF115Q9Y4L5 304 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 SPACA6W5XKT8 324 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
VAMP4-202ENST00000367740 A0A1W2PP18 115 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 SLC35F4A4IF30 521 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ANKDD1BA6NHY2 528 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ELOA3DA6NLF2 546 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 RTCAO00442 366 aaKnown RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 MBD3O95983 291 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ENO2P09104 434 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 RHOXF2BP0C7M4 288 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ALOX15P16050 662 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 TPSB2P20231 275 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 CPN2P22792 545 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ATP5A1P25705 553 aaKnown RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 PGGT1BP53609 377 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 NAP1L1P55209 391 aaKnown RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 TPSAB1Q15661 275 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ELOA3BQ3SY89 546 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 RBM20Q5T481 1227 aaKnown RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 TMEM81Q6P7N7 255 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 AAGABQ6PD74 315 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ST13P4Q8IZP2 240 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ELOA3Q8NG57 546 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 ZMYND19Q96E35 227 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 C11orf24Q96F05 449 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 TRAF4Q9BUZ4 470 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 OSBPL11Q9BXB4 747 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 FRMD8P1Q9BZ68 369 aaPredicted RBP13.17□□□□□ -0.3
VAMP4-202ENST00000367740 NT5DC2Q9H857 520 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 CHODLQ9H9P2 273 aa13.17□□□□□ -0.3
VAMP4-202ENST00000367740 RNF122Q9H9V4 155 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms