RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 LRRC38Q5VT99 294 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 PRAMEF8Q5VWM4 474 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 SLC35E4Q6ICL7 350 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 KLHL10Q6JEL2 608 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 ALKBH5Q6P6C2 394 aaKnown RBP4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 BLOC1S2Q6QNY1 142 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 OTUD6AQ7L8S5 288 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 CATSPER3Q86XQ3 398 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 KLHDC8AQ8IYD2 350 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 RCOR2Q8IZ40 523 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 ARL10Q8N8L6 244 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 OR7A2PQ8NGA2 310 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 HPSE2Q8WWQ2 592 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 FAM3CQ92520 227 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 SMARCD2Q92925 531 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 MTMR9Q96QG7 549 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 PIGQQ9BRB3 760 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 OSBPL8Q9BZF1 889 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 C10orf88Q9H8K7 445 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 TRPV5Q9NQA5 729 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 PDRG1Q9NUG6 133 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 ZNF624Q9P2J8 865 aaPredicted RBP4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 C19orf25Q9UFG5 118 aaPredicted RBP4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 MAN1B1Q9UKM7 699 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 FBXW2Q9UKT8 454 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 GRID1Q9ULK0 1009 aa4.97□□□□□ -1.61
RNU4-39P-201ENST00000362455 DOCK8Q8NF50 2099 aa4.96□□□□□ -1.61
RNU4-39P-201ENST00000362455 SMG1Q96Q15 3661 aaKnown RBP4.96□□□□□ -1.61
RNU4-39P-201ENST00000362455 LAMA5O15230 3695 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 SMIM28A0A1B0GU29 152 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 LRRIQ4A6NIV6 560 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 H3BMM5 538 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 EXTL3O43909 919 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 LRP3O75074 770 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 CDK2AP2O75956 126 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 OLFM2O95897 454 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 MT-ND3P03897 115 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 SBK2P0C263 348 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 THEGLP0DJG4 465 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 GCFC2P16383 781 aaKnown RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 PSMC3P17980 439 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 GDI1P31150 447 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 DNA2P51530 1060 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 PHEXP78562 749 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 NPRL3Q12980 569 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 TFDP1Q14186 410 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 EXT1Q16394 746 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 KIAA1644Q3SXP7 199 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 PM20D1Q6GTS8 502 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 GALNT17Q6IS24 598 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 TMEM207Q6UWW9 146 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 SH2D5Q6ZV89 423 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 RUFY3Q7L099 469 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 CPEB2Q7Z5Q1 589 aaKnown RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 PRUNE1Q86TP1 453 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 SPEM1Q8N4L4 309 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 CHCHD4Q8N4Q1 142 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 ZNF461Q8TAF7 563 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 LRRC8CQ8TDW0 803 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 ST7LQ8TDW4 575 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 C18orf25Q96B23 403 aaPredicted RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 ZNF524Q96C55 264 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 ZNF274Q96GC6 653 aaPredicted RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 BTBD9Q96Q07 612 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 RASL10BQ96S79 203 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 ATP6V0BQ99437 205 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 EPYCQ99645 322 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 C17orf62Q9BQA9 187 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 ALKBH7Q9BT30 221 aaPredicted RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 TRIM6Q9C030 488 aaPredicted RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 THAP2Q9H0W7 228 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 CUEDC2Q9H467 287 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 AKIRIN1Q9H9L7 192 aaPredicted RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 ZFP14Q9HCL3 533 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 PPANQ9NQ55 473 aaKnown RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 GPR173Q9NS66 373 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 PNPLA3Q9NST1 481 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 FAM208BQ5VWN6 2430 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 SETXQ7Z333 2677 aaKnown RBP4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 DMXL2Q8TDJ6 3036 aa4.96□□□□□ -1.62
RNU4-39P-201ENST00000362455 C2orf16Q68DN1 1984 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 FREM2Q5SZK8 3169 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 MYBPHLA2RUH7 354 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 ANTXRLA6NF34 631 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 E5RGE8 158 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 EPHB6O15197 1021 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 ACSL4O60488 711 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 NADKO95544 446 aaPredicted RBP4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 CLPTM1O96005 669 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 PROS1P07225 676 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 GOT1P17174 413 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 HOXA6P31267 233 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 SERPINH1P50454 418 aaKnown RBP4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 ARPP19P56211 112 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 MYL7Q01449 175 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 NCBP1Q09161 790 aaKnown RBP4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 FCHO2Q0JRZ9 810 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 TWF1Q12792 350 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 CETN1Q12798 172 aa4.95□□□□□ -1.62
RNU4-39P-201ENST00000362455 ELAVL2Q12926 359 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms