RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 VNN3Q9NY84 501 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 ZNF221Q9UK13 617 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 PTRH2Q9Y3E5 179 aaKnown RBP17.67■□□□□ 0.42
CLIP2-202ENST00000361545 SLX4Q8IY92 1834 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 C5orf51A6NDU8 294 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 C17orf105B2RV13 164 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 BCAT2O15382 392 aaPredicted RBP17.67■□□□□ 0.42
CLIP2-202ENST00000361545 PRKCAP17252 672 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 TDGQ13569 410 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 ATP6AP1Q15904 470 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 GTDC1Q4AE62 458 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 ANKRD54Q6NXT1 300 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 LCTLQ6UWM7 567 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 ZNF782Q6ZMW2 699 aaPredicted RBP17.67■□□□□ 0.42
CLIP2-202ENST00000361545 ZNF227Q86WZ6 799 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 MBD2Q9UBB5 411 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 PCDHGB2Q9Y5G2 931 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 MYH8P13535 1937 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 HTRA2O43464 458 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 VTCN1Q7Z7D3 282 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 ADAMTS6Q9UKP5 1117 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 DNMT3AQ9Y6K1 912 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 TRPM3Q9HCF6 1732 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 SCGNO76038 276 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 PSMB5P28074 263 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 DCDC1P59894 354 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 MRPL49Q13405 166 aaKnown RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 PTPRRQ15256 657 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 ALG10BQ5I7T1 473 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 EID2Q8N6I1 236 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 CNIH3Q8TBE1 160 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 ACTRT3Q9BYD9 372 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 PTGER1P34995 402 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 MC3RP41968 323 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 CEACAM7Q14002 265 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 MCATQ8IVS2 390 aaKnown RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 GID4Q8IVV7 300 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 MUS81Q96NY9 551 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 INPP5KQ9BT40 448 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 ACOT7O00154 380 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 CPNE6O95741 557 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 ELK4P28324 431 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 XCR1P46094 333 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 CSNK1DP48730 415 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 ENTPD1P49961 510 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 NFATC4Q14934 902 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 MAD2L1BPQ15013 274 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 ZNF613Q6PF04 617 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 KCTD18Q6PI47 426 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 NAA11Q9BSU3 229 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-202ENST00000361545 TMEM185BQ9H7F4 350 aa17.66■□□□□ 0.42
CLIP2-202ENST00000361545 XPNPEP2O43895 674 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 CLCN2P51788 898 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 RPS26P11Q5JNZ5 115 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 LRIF1Q5T3J3 769 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 OR6C4Q8NGE1 309 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 OR13J1Q8NGT2 312 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 MRPL38Q96DV4 380 aaKnown RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 MROQ9BYG7 248 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 DMRT3Q9NQL9 472 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 RBMX2Q9Y388 322 aaKnown RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 LRRC42Q9Y546 428 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 LDB3O75112 727 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 C1SP09871 688 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 CKMT1AP12532 417 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 PEPDP12955 493 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 CELP19835 753 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 ALDH16A1Q8IZ83 802 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 MINDY1Q8N5J2 469 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 ZNF548Q8NEK5 533 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 VN1R2Q8NFZ6 395 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 THAP4Q8WY91 577 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 MYH7P12883 1935 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 RHCEP18577 417 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 TNFRSF1BP20333 461 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 S100A1P23297 94 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 MAPK3P27361 379 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 PRDX3P30048 256 aaKnown RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 MGAT3Q09327 533 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 ST3GAL4Q11206 333 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 GRIK2Q13002 908 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 MEDAGQ5VYS4 303 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 ULK3Q6PHR2 472 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 ENPP6Q6UWR7 440 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 LMNTD1Q8N9Z9 388 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 CPNE2Q96FN4 548 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 HS6ST2Q96MM7 605 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 TREX1Q9NSU2 369 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 TAAR2Q9P1P5 351 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 EXOSC1Q9Y3B2 195 aaKnown RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 CEBPGP53567 150 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 TAS2R43P59537 309 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 ARPC4P59998 168 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 ZBED5Q49AG3 693 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 C6orf132Q5T0Z8 1188 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 KIAA0895LQ68EN5 471 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 LRFN4Q6PJG9 635 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms