RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PRODH2Q9UF12 536 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 COPG1Q9Y678 874 aaKnown RBP12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 LOC400499M0QZD8 3231 aa12.87□□□□□ -0.35
NSMCE1-201ENST00000361439 MGAQ8IWI9 3026 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 SCN2AQ99250 2005 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 CACNA1GO43497 2377 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 A0A1W2PS29 197 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 TTC36A6NLP5 189 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 PRAMEF2O60811 474 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 SCN2BO60939 215 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 COQ9O75208 318 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 ITGAMP11215 1152 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 IL12AP29459 219 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 SOX11P35716 441 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 POLR2JP52435 117 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 POLE2P56282 527 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 DCAF7P61962 342 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 DUSP2Q05923 314 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 RCAN2Q14206 197 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 SPANXN4Q5MJ08 99 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 ANKRD26P1Q6NSI1 321 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 FAM180BQ6P0A1 224 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 BHLHB9Q6PI77 547 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 TMEM64Q6YI46 380 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 RNF111Q6ZNA4 994 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF615Q8N8J6 731 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 PSMF1Q92530 271 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 TTC9Q92623 222 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 EXTL1Q92935 676 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 CIDECQ96AQ7 238 aaPredicted RBP12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 ELP4Q96EB1 424 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF354BQ96LW1 612 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 LMF1Q96S06 567 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 SMAD5Q99717 465 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 ELAC2Q9BQ52 826 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 CNPPD1Q9BV87 410 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 OR10A5Q9H207 317 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF385DQ9H6B1 395 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 GPR83Q9NYM4 423 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 TAS2R9Q9NYW1 312 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 BTNL2Q9UIR0 455 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 PCDHGB4Q9UN71 923 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 C19orf53Q9UNZ5 99 aaPredicted RBP12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 ERVK-19Q9WJR5 959 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 PCSK5Q92824 1860 aa12.86□□□□□ -0.35
NSMCE1-201ENST00000361439 TRBV11-1A0A0K0K1C0 115 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 CCDC22O60826 627 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 SOX30O94993 753 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 CT62P0C5K7 136 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 GPC1P35052 558 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 WNT3P56703 355 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 KCNK10P57789 538 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 RNF4P78317 190 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 PRR5P85299 388 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 MEP1AQ16819 746 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 TRMT12Q53H54 448 aaKnown RBP12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 FHL5Q5TD97 284 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 OR4F3Q6IEY1 312 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 TCTN3Q6NUS6 607 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 PAOXQ6QHF9 649 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 BLOC1S3Q6QNY0 202 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 C19orf48Q6RUI8 117 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 IGFL2Q6UWQ7 119 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 ISLR2Q6UXK2 745 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 SLC29A4Q7RTT9 530 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 PIGWQ7Z7B1 504 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 SLC15A4Q8N697 577 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 LSM14AQ8ND56 463 aaKnown RBP12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 ADCY4Q8NFM4 1077 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 FDCSPQ8NFU4 85 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 SFXN5Q8TD22 340 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 BRIX1Q8TDN6 353 aaKnown RBP12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 TM9SF4Q92544 642 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 TP53INP1Q96A56 240 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 MARK4Q96L34 752 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 CCDC115Q96NT0 180 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 OR52E6Q96RD3 313 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 ARHGAP9Q9BRR9 750 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 SLC25A23Q9BV35 468 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 NUDT9Q9BW91 350 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 RNF32Q9H0A6 362 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF552Q9H707 407 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 ABI3Q9P2A4 366 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 ZNF223Q9UK11 482 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 ITPR1Q14643 2758 aa12.85□□□□□ -0.35
NSMCE1-201ENST00000361439 CFLARO15519 480 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 DNAJB5O75953 348 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 PSMG1O95456 288 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 CBX7O95931 251 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 FAM107AO95990 144 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 CLPSP04118 112 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 SOX18P35713 384 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 ZFP36L2P47974 494 aaKnown RBP12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 NME5P56597 212 aa12.84□□□□□ -0.35
NSMCE1-201ENST00000361439 HSPB3Q12988 150 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms