RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 DEFB134Q4QY38 66 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 KIAA0895LQ68EN5 471 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 FBXW12Q6X9E4 464 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 CLEC20AQ6ZU45 233 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 OR2T33Q8NG76 320 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 TWNKQ96RR1 684 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 DHX33Q9H6R0 707 aaKnown RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 NKX1-2Q9UD57 310 aaPredicted RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 ACAD8Q9UKU7 415 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 F8W036 122 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 SLC7A4O43246 635 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 NUDT21O43809 227 aaKnown RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 PBX2P40425 430 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 BLOC1S1P78537 153 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 C9orf135Q5VTT2 229 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 BRAT1Q6PJG6 821 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 CCDC28AQ8IWP9 274 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 C3orf58Q8NDZ4 430 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 FAM71F1Q96KD3 344 aaPredicted RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 NELL2Q99435 816 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 NDUFV2P19404 249 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 CRHBPP24387 322 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 BDKRB2P30411 391 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 APLNRP35414 380 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 ARG2P78540 354 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 CHRNEQ04844 493 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 MAP4K2Q12851 820 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 TMEM115Q12893 351 aaPredicted RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 DEFB110Q30KQ9 67 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 STEAP3Q658P3 488 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 CDHR3Q6ZTQ4 885 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 OR51L1Q8NGJ5 315 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 OR51Q1Q8NH59 317 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 FAM46BQ96A09 425 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 PBDC1Q9BVG4 233 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 PDE7BQ9NP56 450 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 HS3ST4Q9Y661 456 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 FAM230AA0A1W2PPH8 454 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 VSTM2BA6NLU5 285 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 FTCDNL1E5RQL4 147 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 USP2O75604 605 aaPredicted RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 ADH1BP00325 375 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 IL3P08700 152 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 EPHA4P54764 986 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 SLC36A3Q495N2 470 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 ADGRF1Q5T601 910 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 GID4Q8IVV7 300 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 BANPQ8N9N5 519 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 ASB9Q96DX5 294 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 MOCOSQ96EN8 888 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 CDC6Q99741 560 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 URM1Q9BTM9 101 aaKnown RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 TINAGL1Q9GZM7 467 aaPredicted RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 NSUN3Q9H649 340 aaKnown RBP10.09□□□□□ -0.79
FXR1-202ENST00000357559 FAIMQ9NVQ4 179 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 RHBDD3Q9Y3P4 386 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 ZNF541Q9H0D2 1346 aa10.09□□□□□ -0.79
FXR1-202ENST00000357559 AMY2AP04746 511 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 DRD5P21918 477 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 TGM1P22735 817 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 RAB11BQ15907 218 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 FBXL22Q6P050 247 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 HERPUD2Q9BSE4 406 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.08□□□□□ -0.8
FXR1-202ENST00000357559 CD244Q9BZW8 370 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 RPF2Q9H7B2 306 aaKnown RBP10.08□□□□□ -0.8
FXR1-202ENST00000357559 STARD5Q9NSY2 213 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 OR1A2Q9Y585 309 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 ANKRD66B4E2M5 251 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 PCDH17O14917 1159 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 POLR1CO15160 346 aaPredicted RBP10.08□□□□□ -0.8
FXR1-202ENST00000357559 LCMT2O60294 686 aaKnown RBP10.08□□□□□ -0.8
FXR1-202ENST00000357559 CCL5P13501 91 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 JUNDP17535 347 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 HK3P52790 923 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 CAMK2DQ13557 499 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 HNRNPDQ14103 355 aaKnown RBP10.08□□□□□ -0.8
FXR1-202ENST00000357559 ELOCQ15369 112 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 NSDHLQ15738 373 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 ZNF404Q494X3 552 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 AGTRAPQ6RW13 159 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 CDH20Q9HBT6 801 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 AGTR1P30556 359 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 ZBED5Q49AG3 693 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 MARVELD2Q8N4S9 558 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 TMEM185AQ8NFB2 350 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 SMPDL3AQ92484 453 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 SNX18Q96RF0 628 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 EXOSC1Q9Y3B2 195 aaKnown RBP10.08□□□□□ -0.8
FXR1-202ENST00000357559 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
FXR1-202ENST00000357559 TGM6O95932 706 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 HTR7P34969 479 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 RPS15P62841 145 aaKnown RBP10.08□□□□□ -0.8
FXR1-202ENST00000357559 CST9LP1Q5W188 147 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 REEP3Q6NUK4 255 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 WDSUB1Q8N9V3 476 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 CREB3L4Q8TEY5 395 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 DDIT4LQ96D03 193 aa10.08□□□□□ -0.8
FXR1-202ENST00000357559 DPH2Q9BQC3 489 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms