RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 RXFP3Q9NSD7 469 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 SMOXQ9NWM0 555 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 ENPP5Q9UJA9 477 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 ATP6V1G2-DDX39BF2Z307 99 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 ARPC5O15511 151 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 RNF13O43567 381 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 HCRTR2O43614 444 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 AK1P00568 194 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 RETP07949 1114 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 AKR1C4P17516 323 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 CHRNA4P43681 627 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 FUT2Q10981 343 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 TCEAL1Q15170 157 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 LNX2Q8N448 690 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 SYT14Q8NB59 555 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 PAPD5Q8NDF8 572 aaKnown RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 FCRL3Q96P31 734 aaPredicted RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 MFFQ9GZY8 342 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 EFCAB7A8K855 629 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 ZNF705GA8MUZ8 300 aaPredicted RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 J3KR12 359 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 ADRB3P13945 408 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 MTNR1AP48039 350 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 RIDAP52758 137 aaKnown RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 STC1P52823 247 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 RPP30P78346 268 aaKnown RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 PMS2P3Q13401 168 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 MFSD13AQ14CX5 517 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 ELOCQ15369 112 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 TMIGD1Q6UXZ0 262 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 TICAM1Q8IUC6 712 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 FRZBQ92765 325 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 FZD3Q9NPG1 666 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 A0A0A6YYH2 397 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 A6NJ64 397 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 SPDEFO95238 335 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 HLA-EP13747 358 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 EIF2DP41214 584 aaKnown RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 ZNF84P51523 738 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 KEAP1Q14145 624 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 GRIN2CQ14957 1233 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 RRNAD1Q96FB5 475 aaKnown RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 SUSD3Q96L08 255 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 PCDHAC2Q9Y5I4 1007 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 CD8B2A6NJW9 211 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 INPPL1O15357 1258 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 CD8BP10966 210 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 C6orf136Q5SQH8 315 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 NIPAL3Q6P499 406 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 SLC22A25Q6T423 547 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 RHEBL1Q8TAI7 183 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 KCNJ9Q92806 393 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 SLC45A1Q9Y2W3 748 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 PLEKHM1Q9Y4G2 1056 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 RIPK3Q9Y572 518 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 PCDHGA2Q9Y5H1 932 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 NFAT5O94916 1531 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 DIP2CQ9Y2E4 1556 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 E9PCH4 1651 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 H3BMQ9 156 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 SDHDO14521 159 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 HEXBP07686 556 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 GGT1P19440 569 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 PTPN6P29350 595 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 KDELR2P33947 212 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 RPS5P46782 204 aaKnown RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 PLEKHS1Q5SXH7 462 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 SFRP4Q6FHJ7 346 aaPredicted RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 DESI1Q6ICB0 168 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 KLBQ86Z14 1044 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 MRPL41Q8IXM3 137 aaKnown RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 ZNF440Q8IYI8 595 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 OR13C3Q8NGS6 347 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 COG8Q96MW5 612 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 AIG1Q9NVV5 245 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 ERCC6L2Q5T890 1561 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 NID2Q14112 1375 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 A6NCN8 305 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 TXNL1O43396 289 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 NDUFV2P19404 249 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 LEPRP48357 1165 aaKnown RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 ETV1P50549 477 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 ODF4Q2M2E3 257 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 AGAP6Q5VW22 663 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 FAM199XQ6PEV8 388 aaPredicted RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 IGFN1Q86VF2 1251 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 CILP2Q8IUL8 1156 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 FAM83FQ8NEG4 500 aaPredicted RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 PHOSPHO1Q8TCT1 267 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 ZDHHC12Q96GR4 267 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 AGAP4Q96P64 663 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 P2RY13Q9BPV8 354 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 LHPPQ9H008 270 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 APOBEC3GQ9HC16 384 aaKnown RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 PRODH2Q9UF12 536 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 ZNF541Q9H0D2 1346 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 POP7O75817 140 aaKnown RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 MRPL3P09001 348 aaKnown RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 SLC2A5P22732 501 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms