RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TMEM74BQ9NUR3 256 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 EXD2Q9NVH0 621 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 P2RX2Q9UBL9 471 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ACAD8Q9UKU7 415 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 NAALAD2Q9Y3Q0 740 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ORC6Q9Y5N6 252 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 CEPT1Q9Y6K0 416 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF780BQ9Y6R6 833 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 MYO10Q9HD67 2058 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 MAP1BP46821 2468 aaKnown RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 DSPPQ9NZW4 1301 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 NUP214P35658 2090 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 A0A0G2JPF8 293 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HNRNPCL2B2RXH8 293 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 B4DGG1 531 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HNRNPCL3B7ZW38 293 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 J3KTA2 159 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 FFAR1O14842 300 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 BCKDKO14874 412 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HCRTR1O43613 425 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SLC28A2O43868 658 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SEMA7AO75326 666 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SERPINB7O75635 380 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SEC24DO94855 1032 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CPNE6O95741 557 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 EPPINO95925 133 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 IFNW1P05000 195 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HMGN2P05204 90 aaKnown RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 FESP07332 822 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CHRM4P08173 479 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CCDC159P0C7I6 412 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 C8orf89P0DMQ9 161 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HNRNPCL4P0DMR1 293 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 NR2F1P10589 423 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ANXA8P13928 327 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CPMP14384 443 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ST6GAL1P15907 406 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CDH2P19022 906 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 BCKDHBP21953 392 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 FUT4P22083 530 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CBLP22681 906 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 PAX7P23759 505 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HOXA6P31267 233 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 TLX1P31314 330 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 MC3RP41968 323 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 XKP51811 444 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CRISP3P54108 245 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CXCR4P61073 352 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SIM1P81133 766 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 PRR5P85299 388 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SPIBQ01892 262 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 RAPSNQ13702 412 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 GNA13Q14344 377 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 LASP1Q14847 261 aaKnown RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 LTB4RQ15722 352 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SYPL1Q16563 259 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 MICAQ29983 383 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 EXOC3L2Q2M3D2 409 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 FHL5Q5TD97 284 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HEPHL1Q6MZM0 1159 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 TCTN3Q6NUS6 607 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 MFSD12Q6NUT3 480 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ARMC6Q6NXE6 501 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 KLHL35Q6PF15 583 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 TMEM107Q6UX40 140 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SLC36A4Q6YBV0 504 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 RBM44Q6ZP01 1051 aaKnown RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF438Q7Z4V0 828 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 GALNT5Q7Z7M9 940 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 TSPYL5Q86VY4 417 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF761Q86XN6 746 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CCDC71Q8IV32 467 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 MCATQ8IVS2 390 aaKnown RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ALDH16A1Q8IZ83 802 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SIX5Q8N196 739 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CA13Q8N1Q1 262 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 OR2L13Q8N349 312 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 LRRC25Q8N386 305 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 PARP8Q8N3A8 854 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 DEFB119Q8N690 84 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SLC5A8Q8N695 610 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF655Q8N720 491 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 C19orf47Q8N9M1 422 aaKnown RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 TTC29Q8NA56 475 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 SETD9Q8NE22 299 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 NUP43Q8NFH3 380 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 OR7G2Q8NG99 324 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 OR10G2Q8NGC3 310 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 OR4D11Q8NGI4 311 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 OR5D16Q8NGK9 328 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 ZCCHC10Q8TBK6 192 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 XAGE5Q8WWM1 108 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 RASSF5Q8WWW0 418 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HOXB13Q92826 284 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 RERGQ96A58 199 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-203ENST00000350034 TMIGD2Q96BF3 282 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 C16orf58Q96GQ5 468 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 HRASLS5Q96KN8 279 aa6.5□□□□□ -1.37
TRIM55-203ENST00000350034 CNDP2Q96KP4 475 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms