RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 M0R233 179 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 GABRPO00591 440 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 ADAP00813 363 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 GRK4P32298 578 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
RLIM-202ENST00000349225 MPEG1Q2M385 716 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 CPTPQ5TA50 214 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 PGBD2Q6P3X8 592 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 OR4D11Q8NGI4 311 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 ATOH1Q92858 354 aaPredicted RBP13.51□□□□□ -0.25
RLIM-202ENST00000349225 GPA33Q99795 319 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 ARHGAP9Q9BRR9 750 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 SAV1Q9H4B6 383 aaPredicted RBP13.51□□□□□ -0.25
RLIM-202ENST00000349225 PTTG3PQ9NZH4 202 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 MAP4K5Q9Y4K4 846 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 AP1M2Q9Y6Q5 423 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 GLYATL1P3A0A0U1RQE8 302 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SYN3O14994 580 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SMAD6O43541 496 aaKnown RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 PRMT3O60678 531 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 MMP20O60882 483 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 DHFRP00374 187 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 ANXA5P08758 320 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 NMBP08949 121 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 CXCL2P19875 107 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 GIFP27352 417 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 C21orf58P58505 322 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 DUSP6Q16828 381 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 RPS26P11Q5JNZ5 115 aaPredicted RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 SFRP5Q5T4F7 317 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 LYPD4Q6UWN0 246 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 NLRC3Q7RTR2 1065 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 KRT74Q7RTS7 529 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 MARCH9Q86YJ5 346 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 FAM26EQ8N5C1 309 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 RFT1Q96AA3 541 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 CIDECQ96AQ7 238 aaPredicted RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 ZNF416Q9BWM5 594 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 PDGFDQ9GZP0 370 aaPredicted RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 MVB12BQ9H7P6 319 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 DNASE2O00115 360 aaPredicted RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 CD160O95971 181 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 ZNF7P17097 686 aaPredicted RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 SLC6A12P48065 614 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 CDK6Q00534 326 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 FZD5Q13467 585 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 GNA13Q14344 377 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 GCNT6Q5T4J0 391 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 MON1AQ86VX9 555 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SPATA2LQ8IUW3 424 aaPredicted RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 OR2T35Q8NGX2 323 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 OTUB1Q96FW1 271 aaPredicted RBP13.5□□□□□ -0.25
RLIM-202ENST00000349225 SLC35A5Q9BS91 424 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SYT17Q9BSW7 474 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 H2AFJQ9BTM1 129 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SLC6A17Q9H1V8 727 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 ENAMQ9NRM1 1142 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 SCML2Q9UQR0 700 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 GSTK1Q9Y2Q3 226 aa13.5□□□□□ -0.25
RLIM-202ENST00000349225 DRD2P14416 443 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 MAPKAPK2P49137 400 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 RETSATQ6NUM9 610 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 LINGO4Q6UY18 593 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 LHFPL3Q86UP9 236 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 GPR32P1Q8NGA4 272 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 WDR20Q8TBZ3 569 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 SFXN2Q96NB2 322 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 OR2M2Q96R28 347 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 UBL7Q96S82 380 aaPredicted RBP13.49□□□□□ -0.25
RLIM-202ENST00000349225 WRAP53Q9BUR4 548 aaKnown RBP13.49□□□□□ -0.25
RLIM-202ENST00000349225 METTL17Q9H7H0 456 aaPredicted RBP13.49□□□□□ -0.25
RLIM-202ENST00000349225 IFT22Q9H7X7 185 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 RC3H2Q9HBD1 1191 aaKnown RBP13.49□□□□□ -0.25
RLIM-202ENST00000349225 VPS29Q9UBQ0 182 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 ENOPH1Q9UHY7 261 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 PHF11Q9UIL8 331 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 GPR52Q9Y2T5 361 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 RRN3P2A6NIE6 340 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 H3BNC9 293 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 KPNA5O15131 536 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 OR10H3O60404 316 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 C6orf47O95873 294 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 POMCP01189 267 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 ANKRD34CP0C6C1 535 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 SGSHP51688 502 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 ZNF155Q12901 538 aaPredicted RBP13.49□□□□□ -0.25
RLIM-202ENST00000349225 CHIT1Q13231 466 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 TCTN3Q6NUS6 607 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 LUZP2Q86TE4 346 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 MEX3DQ86XN8 651 aaKnown RBP13.49□□□□□ -0.25
RLIM-202ENST00000349225 VRK3Q8IV63 474 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 PDXPQ96GD0 296 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 DDOQ99489 341 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 ADGRE3Q9BY15 652 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 NLNQ9BYT8 704 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 ATG10Q9H0Y0 220 aa13.49□□□□□ -0.25
RLIM-202ENST00000349225 CYSLTR2Q9NS75 346 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms