RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TGM7Q96PF1 710 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 PIP5K1AQ99755 562 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 NPLQ9BXD5 320 aaPredicted RBP18.78■□□□□ 0.6
RTN1-202ENST00000342503 RIBC2Q9H4K1 309 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 ANKHQ9HCJ1 492 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 RHPN2P1A8MT19 583 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 FAM227AF5H4B4 570 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 SLC16A6O15403 523 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 LDB3O75112 727 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 RDH16O75452 317 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 SERPINB7O75635 380 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 IFNW1P05000 195 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 PORP16435 677 aaPredicted RBP18.77■□□□□ 0.6
RTN1-202ENST00000342503 KCNJ5P48544 419 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 MAN2A2P49641 1150 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 CRISP3P54108 245 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 TPD52P55327 224 aaPredicted RBP18.77■□□□□ 0.6
RTN1-202ENST00000342503 KCNC4Q03721 635 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 PRTGQ2VWP7 1150 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 FAM111BQ6SJ93 734 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 OR9A4Q8NGU2 314 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 OR52J3Q8NH60 311 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 GIPC3Q8TF64 312 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 PROX1Q92786 737 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 CXorf56Q9H5V9 222 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 BCL2L10Q9HD36 194 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 KRT84Q9NSB2 600 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 SEC14L3Q9UDX4 400 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 FAM32AQ9Y421 112 aaKnown RBP18.77■□□□□ 0.6
RTN1-202ENST00000342503 RNF215Q9Y6U7 377 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 PCDH15Q96QU1 1955 aa18.77■□□□□ 0.6
RTN1-202ENST00000342503 FGF17O60258 216 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 SRPX2O60687 465 aaPredicted RBP18.77■□□□□ 0.59
RTN1-202ENST00000342503 NME6O75414 186 aaPredicted RBP18.77■□□□□ 0.59
RTN1-202ENST00000342503 JRKO75564 520 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 ELK4P28324 431 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 FNTBP49356 437 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 RAB38P57729 211 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 BNIP3Q12983 259 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 EXOC3L2Q2M3D2 409 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 NKAIN2Q5VXU1 208 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 ZNF605Q86T29 641 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 KRT73Q86Y46 540 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 RASSF5Q8WWW0 418 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 ACTRT3Q9BYD9 372 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 YTHDF1Q9BYJ9 559 aaKnown RBP18.77■□□□□ 0.59
RTN1-202ENST00000342503 ING2Q9H160 280 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 DDX18Q9NVP1 670 aaKnown RBP18.77■□□□□ 0.59
RTN1-202ENST00000342503 NTMQ9P121 344 aa18.77■□□□□ 0.59
RTN1-202ENST00000342503 TRIM64A6NGJ6 449 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 ASNA1O43681 348 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 MED26O95402 600 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 PABPC4LP0CB38 370 aaKnown RBP18.76■□□□□ 0.59
RTN1-202ENST00000342503 RHCEP18577 417 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 GABRA4P48169 554 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 GNA13Q14344 377 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 NADK2Q4G0N4 442 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 GPAT3Q53EU6 434 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 ZNF628Q5EBL2 1059 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 ZNF691Q5VV52 312 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 NCSTNQ92542 709 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 ZNF354BQ96LW1 612 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 ACER3Q9NUN7 267 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 DNAAF2Q9NVR5 837 aaKnown RBP18.76■□□□□ 0.59
RTN1-202ENST00000342503 LRIT1Q9P2V4 623 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 CLCA2Q9UQC9 943 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 PCDHGA8Q9Y5G5 932 aa18.76■□□□□ 0.59
RTN1-202ENST00000342503 NINQ8N4C6 2090 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 BCKDKO14874 412 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 UGT2B11O75310 529 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 GPR75O95800 540 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 PDGFBP01127 241 aaPredicted RBP18.75■□□□□ 0.59
RTN1-202ENST00000342503 CYP4B1P13584 511 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 ALDH4A1P30038 563 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 SOX18P35713 384 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 MLLT3P42568 568 aaPredicted RBP18.75■□□□□ 0.59
RTN1-202ENST00000342503 CLK3P49761 638 aaKnown RBP18.75■□□□□ 0.59
RTN1-202ENST00000342503 EPHA4P54764 986 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 NR1H2P55055 460 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 TUBA4AP68366 448 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 GANABQ14697 944 aaKnown RBP18.75■□□□□ 0.59
RTN1-202ENST00000342503 CWF19L1Q69YN2 538 aaKnown RBP18.75■□□□□ 0.59
RTN1-202ENST00000342503 MAMSTRQ6ZN01 415 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 WDR53Q7Z5U6 358 aaPredicted RBP18.75■□□□□ 0.59
RTN1-202ENST00000342503 OR2L13Q8N349 312 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 SIMC1Q8NDZ2 872 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 OR10G2Q8NGC3 310 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 TANKQ92844 425 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 MS4A4EQ96PG1 132 aa18.75■□□□□ 0.59
RTN1-202ENST00000342503 A0A087WXM4 84 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 A0A0A6YYC8 382 aaPredicted RBP18.74■□□□□ 0.59
RTN1-202ENST00000342503 IGHV5-51A0A0C4DH38 117 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 A0A0G2JPF8 293 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 TLCD2A6NGC4 264 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 HNRNPCL2B2RXH8 293 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 HNRNPCL3B7ZW38 293 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 I3L1I5 382 aaPredicted RBP18.74■□□□□ 0.59
RTN1-202ENST00000342503 CHST10O43529 356 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 HNRNPCL4P0DMR1 293 aa18.74■□□□□ 0.59
RTN1-202ENST00000342503 CDH2P19022 906 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms