RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 YARS2Q9Y2Z4 477 aaKnown RBP11.84□□□□□ -0.51
RIOK3-201ENST00000339486 QSER1Q2KHR3 1735 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 B4DXG7 233 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 WISP3O95389 354 aaPredicted RBP11.84□□□□□ -0.51
RIOK3-201ENST00000339486 ARSBP15848 533 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 SSTR2P30874 369 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 ACVR1BP36896 505 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 PSMD4P55036 377 aaKnown RBP11.84□□□□□ -0.51
RIOK3-201ENST00000339486 LRRC32Q14392 662 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 DUSP7Q16829 419 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 COMMD7Q86VX2 200 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 BEST4Q8NFU0 473 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 RPLP0P6Q8NHW5 317 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 GLYATL1Q969I3 302 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 CREB3L1Q96BA8 519 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 BRF2Q9HAW0 419 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 MARK1Q9P0L2 795 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 HYKKA2RU49 373 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 PROM1O43490 865 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 FRS3O43559 492 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 FCER2P06734 321 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 ZNF30P17039 623 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 PTGER1P34995 402 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
RIOK3-201ENST00000339486 SLC9A5Q14940 896 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 GARNL3Q5VVW2 1013 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 CHST14Q8NCH0 376 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 OSTF1Q92882 214 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 C17orf62Q9BQA9 187 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 ACER3Q9NUN7 267 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 NAALAD2Q9Y3Q0 740 aa11.84□□□□□ -0.51
RIOK3-201ENST00000339486 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
RIOK3-201ENST00000339486 ABHD14A-ACY1A0A1B0GW23 586 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 FABP7O15540 132 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 PRODHO43272 600 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 AKR7A2O43488 359 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 ARAFP10398 606 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 GPR4P46093 362 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 ZFP36L2P47974 494 aaKnown RBP11.83□□□□□ -0.51
RIOK3-201ENST00000339486 CTBP2P56545 445 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 AP3S2P59780 193 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 RRAS2P62070 204 aaPredicted RBP11.83□□□□□ -0.51
RIOK3-201ENST00000339486 BCL2A1Q16548 175 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 SLC25A25Q6KCM7 469 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 KIF18BQ86Y91 864 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 CCDC116Q8IYX3 515 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 KIAA1958Q8N8K9 716 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 TFGQ92734 400 aaPredicted RBP11.83□□□□□ -0.51
RIOK3-201ENST00000339486 PDCD10Q9BUL8 212 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 CDCA4Q9BXL8 241 aa11.83□□□□□ -0.51
RIOK3-201ENST00000339486 MYO7AQ13402 2215 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 ERI3O43414 337 aaKnown RBP11.83□□□□□ -0.52
RIOK3-201ENST00000339486 CCR8P51685 355 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 COL9A2Q14055 689 aaPredicted RBP11.83□□□□□ -0.52
RIOK3-201ENST00000339486 GPR68Q15743 365 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 PODNL1Q6PEZ8 512 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 FTMTQ8N4E7 242 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.83□□□□□ -0.52
RIOK3-201ENST00000339486 GNPDA2Q8TDQ7 276 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 FAM46AQ96IP4 442 aaKnown RBP11.83□□□□□ -0.52
RIOK3-201ENST00000339486 OPALINQ96PE5 141 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 MCHR1Q99705 422 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 CALML5Q9NZT1 146 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 ZNF69Q9UC07 566 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 NDRG2Q9UN36 371 aaKnown RBP11.83□□□□□ -0.52
RIOK3-201ENST00000339486 FXYD6-FXYD2A0A087WZ82 144 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 SCAMP1O15126 338 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 INPPL1O15357 1258 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 TEX28O15482 410 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 ADAM12O43184 909 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 H2AFB2P0C5Z0 115 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 GCGRP47871 477 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 OMPP47874 163 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 CCR4P51679 360 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 FKBP1BP68106 108 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 ZNF33BQ06732 778 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 SNTA1Q13424 505 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 KIAA0040Q15053 153 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 LAIR2Q6ISS4 152 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 MTFR2Q6P444 385 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 IL20RBQ6UXL0 311 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 FRRS1Q6ZNA5 592 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 NATD1Q8N6N6 113 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 ACBD7Q8N6N7 88 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 CLDN22Q8N7P3 220 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 SRFBP1Q8NEF9 429 aaKnown RBP11.83□□□□□ -0.52
RIOK3-201ENST00000339486 OR4F15Q8NGB8 312 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 OR5D16Q8NGK9 328 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 ARHGAP39Q9C0H5 1083 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 FXYD6Q9H0Q3 95 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 IRAK3Q9Y616 596 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 AP1M2Q9Y6Q5 423 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 LEFTY1O75610 366 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 TRAPPC2P0DI81 140 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 TRAPPC2BP0DI82 140 aa11.83□□□□□ -0.52
RIOK3-201ENST00000339486 CSNK2A2P19784 350 aaPredicted RBP11.83□□□□□ -0.52
RIOK3-201ENST00000339486 TLX1P31314 330 aaPredicted RBP11.83□□□□□ -0.52
RIOK3-201ENST00000339486 SFRP4Q6FHJ7 346 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms