RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PSME2Q9UL46 239 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 EDARQ9UNE0 448 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 NPFFR2Q9Y5X5 522 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 CHCHD2Q9Y6H1 151 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 DNAJC13O75165 2243 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 C15orf38-AP3S2A0A0A6YYH1 394 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 GOLGA6L10A6NI86 522 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 POC1B-GALNT4F8VUJ3 575 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 STX16-NPEPL1H3BU86 382 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 STX16O14662 325 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 CDH16O75309 829 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 URI1O94763 535 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 ACSL3O95573 720 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 COL6A2P12110 1019 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 PORP16435 677 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 CNTFP26441 200 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 SSTR4P31391 388 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 PEX19P40855 299 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 MAPK12P53778 367 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 RIPPLY3P57055 190 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 DUSP8Q13202 625 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 RPS6KA2Q15349 733 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 SGO1Q5FBB7 561 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 TECRLQ5HYJ1 363 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 TEX35Q5T0J7 233 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 RIPPLY2Q5TAB7 128 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 LGSNQ5TDP6 509 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 RTL6Q6ICC9 239 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 BRICD5Q6PL45 260 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 ARSKQ6UWY0 536 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 PLD6Q8N2A8 252 aaKnown RBP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 C17orf53Q8N3J3 647 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 OR7G1Q8NGA0 311 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 OR52B6Q8NGF0 335 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 TRPC4APQ8TEL6 797 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 IFT81Q8WYA0 676 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 UCN3Q969E3 161 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 SECISBP2Q96T21 854 aaKnown RBP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF717Q9BY31 904 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 SLC6A15Q9H2J7 730 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 NINJ2Q9NZG7 142 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 SPRR3Q9UBC9 169 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 BCAP29Q9UHQ4 241 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 ADAM29Q9UKF5 820 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 CNOT11Q9UKZ1 510 aaKnown RBP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 SNX6Q9UNH7 406 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 SLC12A4Q9UP95 1085 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 CFL2Q9Y281 166 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 FAM215AQ9Y5M1 114 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 NINQ8N4C6 2090 aa9.79□□□□□ -0.84
CAPN3-202ENST00000337571 ANKRD17O75179 2603 aaKnown RBP9.79□□□□□ -0.84
CAPN3-202ENST00000337571 ARHGAP21Q5T5U3 1957 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 C1orf226A1L170 272 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 DVL2O14641 736 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 LRATO95237 230 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 OTCP00480 354 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 IL2RAP01589 272 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 CPMP14384 443 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 CD1EP15812 388 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 CSNK2A2P19784 350 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-202ENST00000337571 UQCRC1P31930 480 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 GCKP35557 465 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 ADH7P40394 386 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 KIR2DL3P43628 341 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 FBXW4P57775 412 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 FUT7Q11130 342 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 TMEM64Q6YI46 380 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 SPNS3Q6ZMD2 512 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 RELL1Q8IUW5 271 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 LIX1LQ8IVB5 337 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 PM20D2Q8IYS1 436 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 ULK2Q8IYT8 1036 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF615Q8N8J6 731 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 OR4F6Q8NGB9 312 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 SLC44A1Q8WWI5 657 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 RILPQ96NA2 401 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 GNRHR2Q96P88 292 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 MRPL57Q9BQC6 102 aaKnown RBP9.78□□□□□ -0.84
CAPN3-202ENST00000337571 ANGPTL4Q9BY76 406 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 MRPL1Q9BYD6 325 aaKnown RBP9.78□□□□□ -0.84
CAPN3-202ENST00000337571 BRINP2Q9C0B6 783 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 PROK2Q9HC23 129 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF358Q9NW07 568 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 TEX10Q9NXF1 929 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-202ENST00000337571 XPR1Q9UBH6 696 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 PCTPQ9UKL6 214 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 CAMK2AQ9UQM7 478 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF780BQ9Y6R6 833 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 NCKAP5O14513 1909 aa9.78□□□□□ -0.84
CAPN3-202ENST00000337571 TRIM3O75382 744 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-202ENST00000337571 ERAL1O75616 437 aaKnown RBP9.77□□□□□ -0.85
CAPN3-202ENST00000337571 ESRRBO95718 433 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 EPPINO95925 133 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 CLPSP04118 112 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 HPNP05981 417 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 NAGAP17050 411 aa9.77□□□□□ -0.85
CAPN3-202ENST00000337571 ENDOUP21128 410 aaKnown RBP9.77□□□□□ -0.85
CAPN3-202ENST00000337571 ABCD3P28288 659 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms