RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 LSM1O15116 133 aaKnown RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 GGT2P36268 569 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 NKX3-2P78367 333 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 SEC14L1Q92503 715 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 WDR77Q9BQA1 342 aaPredicted RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 SYT4Q9H2B2 425 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 PIAS3Q9Y6X2 628 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 NCOR1O75376 2440 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 PATJQ8NI35 1801 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 UNC119BA6NIH7 251 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 TRIM64CA6NLI5 447 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 G6PDP11413 515 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 CRABP1P29762 137 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 DCDC1P59894 354 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 CA9Q16790 459 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 CNPY1Q3B7I2 92 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 DPY19L3Q6ZPD9 716 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 SCRN2Q96FV2 425 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 PGAM5Q96HS1 289 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 GIN1Q9NXP7 522 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 GALPQ9UBC7 116 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 WNT7AO00755 349 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 GSK3BP49841 420 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 CSNK2A1P68400 391 aaPredicted RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 TCEAL8Q8IYN2 117 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 HHIPL1Q96JK4 782 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 PWWP2AQ96N64 755 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 ZDHHC2Q9UIJ5 367 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 CA14Q9ULX7 337 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 RPS3P23396 243 aaKnown RBP eCLIP11.72□□□□□ -0.533e-50■■□□□ 13.5
FN1-202ENST00000336916 VAMP1P23763 118 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 WSCD2Q2TBF2 565 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 ZNF517Q6ZMY9 492 aaPredicted RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 ZC3H10Q96K80 434 aaKnown RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 MRPS14O60783 128 aaKnown RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 RPP14O95059 124 aaKnown RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 PRKCGP05129 697 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 C6P13671 934 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 MAZP56270 477 aaKnown RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 ABHD5Q8WTS1 349 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 TRUB1Q8WWH5 349 aaKnown RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 PITX2Q99697 317 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 ZNF446Q9NWS9 450 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 OR6C2Q9NZP2 312 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 BOKQ9UMX3 212 aaPredicted RBP11.72□□□□□ -0.53
FN1-202ENST00000336916 PROS1P07225 676 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 ETV3P41162 512 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 GDF10P55107 478 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 CAV3P56539 151 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 TMBIM1Q969X1 311 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 RNF11Q9Y3C5 154 aa11.72□□□□□ -0.53
FN1-202ENST00000336916 DLX3O60479 287 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 CD40LGP29965 261 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 PKDCCQ504Y2 493 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 MLXQ9UH92 298 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 DIDO1Q9BTC0 2240 aaKnown RBP11.71□□□□□ -0.53
FN1-202ENST00000336916 ZBTB22O15209 634 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 HLA-EP13747 358 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 HTR1EP28566 365 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 YPEL5P62699 121 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 LYSMD4Q5XG99 296 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 OR8H3Q8N146 312 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 OR8S1Q8NH09 359 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 BADQ92934 168 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 SLC45A3Q96JT2 553 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 CLSTN3Q9BQT9 956 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 SDHAF2Q9NX18 166 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 TRIOBPQ9H2D6 2365 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 GGT3PA6NGU5 568 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 M0QZQ0 153 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 DCAF7P61962 342 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 SUSD1Q6UWL2 747 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 MRPL10Q7Z7H8 261 aaKnown RBP11.71□□□□□ -0.53
FN1-202ENST00000336916 CCDC116Q8IYX3 515 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 MMP27Q9H306 513 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 ZDHHC18Q9NUE0 388 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 VNN2O95498 520 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 HEXAP06865 529 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 S100PP25815 95 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 AQP4P55087 323 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 TLE3Q04726 772 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 ZNF773Q6PK81 442 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 MARCH9Q86YJ5 346 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 LNX2Q8N448 690 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 MYLKQ15746 1914 aa11.71□□□□□ -0.53
FN1-202ENST00000336916 C2orf71A6NGG8 1288 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 VILLO15195 856 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 RP2O75695 350 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 LCN1P31025 176 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 APLNRP35414 380 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 RBMXP38159 391 aaKnown RBP11.71□□□□□ -0.54
FN1-202ENST00000336916 MAGEA8P43361 318 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 SLC22A10Q63ZE4 541 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 ERMP1Q7Z2K6 904 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 SLC2A12Q8TD20 617 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 SGTBQ96EQ0 304 aa11.71□□□□□ -0.54
FN1-202ENST00000336916 A0A0J9YY10 115 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms