RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 OR51A7Q8NH64 312 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SLAMF9Q96A28 289 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 OR51E2Q9H255 320 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PLCXD1Q9NUJ7 323 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PPP4R1LQ9P1A2 415 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF701M0R085 212 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SLC31A1O15431 190 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 RHCEP18577 417 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 GCGRP47871 477 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SNU13P55769 128 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 HSD11B2P80365 405 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 VITQ6UXI7 678 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 HACD2Q6Y1H2 254 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SCAMP5Q8TAC9 235 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 NT5C3BQ969T7 300 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 NTAN1Q96AB6 310 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 RBP7Q96R05 134 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 MYEF2Q9P2K5 600 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ASB3Q9Y575 518 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 NOX1Q9Y5S8 564 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 KNG1P01042 644 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 UBBP0CG47 229 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 UBCP0CG48 685 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 NR2C1P13056 603 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 AGXTP21549 392 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 OXTRP30559 389 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SOX3P41225 446 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 CAV2P51636 162 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 RPS27AP62979 156 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 UBA52P62987 128 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 CYCSP99999 105 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 FAM205BPQ63HN1 556 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 NOXRED1Q6NXP6 359 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 TMEM150AQ86TG1 271 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 TSPYL5Q86VY4 417 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PPTC7Q8NI37 304 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF516Q92618 1163 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF416Q9BWM5 594 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 TCEAL2Q9H3H9 227 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 MRM3Q9HC36 420 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 INTS6Q9UL03 887 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 RNF215Q9Y6U7 377 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 TNS2Q63HR2 1409 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 FRMPD1Q5SYB0 1578 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 USP32Q8NFA0 1604 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 WTIPA6NIX2 430 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 A8MXE2 369 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PRAF2O60831 178 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ATE1O95260 518 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 MT-ND4P03905 459 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 BMP2P12643 396 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 OGDHQ02218 1023 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PLGLB1Q02325 96 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 C11orf91Q3C1V1 193 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 BCL7AQ4VC05 210 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PHF19Q5T6S3 580 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 LCN8Q6JVE9 175 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 KBTBD6Q86V97 674 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 PCNPQ8WW12 178 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 DNAJA3Q96EY1 480 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 DPYSL5Q9BPU6 564 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 FN3KQ9H479 309 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SRA1Q9HD15 236 aaKnown RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ACOT13Q9NPJ3 140 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SERTAD4Q9NUC0 356 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 TMEM100Q9NV29 134 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 CPED1A4D0V7 1026 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 KDELR2P33947 212 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ETV4P43268 484 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 GPR4P46093 362 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 LILRA4P59901 499 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 HNRNPKP61978 463 aaKnown RBP eCLIP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 CDK5R2Q13319 367 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 KIAA1211LQ6NV74 962 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 LRFN4Q6PJG9 635 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF679Q8IYX0 411 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ACBD7Q8N6N7 88 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 Q8N9G6 341 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SIGLEC10Q96LC7 697 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 GPR52Q9Y2T5 361 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 SLC22A31A6NKX4 558 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 BHLHE40O14503 412 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 CLDN7O95471 211 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 EPHA1P21709 976 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ID2Q02363 134 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 LRIT3Q3SXY7 679 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ARSIQ5FYB1 569 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 HIST2H3PS2Q5TEC6 136 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 TANGO2Q6ICL3 276 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 CHADLQ6NUI6 762 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 RELL1Q8IUW5 271 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 C12orf45Q8N5I9 185 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 CHFRQ96EP1 664 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF599Q96NL3 588 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms