RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 LRIG1Q96JA1 1093 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 FAM20AQ96MK3 541 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 LRRC4Q9HBW1 653 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 LRRC7Q96NW7 1537 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ANKRD28O15084 1053 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 SEC14L2O76054 403 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 CIAO1O76071 339 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 OTCP00480 354 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 CD99P14209 185 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 FSTP19883 344 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 MMP8P22894 467 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 CLCN4P51793 760 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 KIAA1024LP59773 190 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 PDK1Q15118 436 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ARMCX2Q7L311 632 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 PCBD2Q9H0N5 130 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 RSAD1Q9HA92 442 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 PCTPQ9UKL6 214 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 PIK3C2BO00750 1634 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 COL15A1P39059 1388 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR5H14A6NHG9 310 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR2C1O95371 312 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 HIST1H2ABP04908 130 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC25A5P05141 298 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ARAFP10398 606 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZP3P21754 424 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ACTR1BP42025 376 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 HLCSP50747 726 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 RPS16P62249 146 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 LIPEQ05469 1076 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ALX1Q15699 326 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF124Q15973 351 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF805Q5CZA5 627 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 TSTD2Q5T7W7 516 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 FOXR2Q6PJQ5 311 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBPL2Q6SJ96 375 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 HIST3H2AQ7L7L0 130 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 HIST1H2ACQ93077 130 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 TTPALQ9BTX7 342 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 MCOLN1Q9GZU1 580 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 SAP130Q9H0E3 1048 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 FBXO8Q9NRD0 319 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 EBF1Q9UH73 591 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 NPTNQ9Y639 398 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 NUPL2O15504 423 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 SIGLEC6O43699 453 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR2J2O76002 312 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 SIX6O95475 246 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 AK1P00568 194 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ACO1P21399 889 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 CTSKP43235 329 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 RPL21P46778 160 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 KCNJ1P48048 391 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC11A1P49279 550 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 MXD1Q05195 221 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 PLCXD2Q0VAA5 305 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 BNIP3Q12983 259 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 IKBKEQ14164 716 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 PDIA6Q15084 440 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF630Q2M218 657 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 SOHLH1Q5JUK2 328 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ELFN2Q5R3F8 820 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 C12orf40Q86WS4 652 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 MRPL45Q9BRJ2 306 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 CHIAQ9BZP6 476 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 AK3Q9UIJ7 227 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNRF3Q9ULT6 936 aa5.83□□□□□ -1.48
CDC42BPA-201ENST00000334218 MYO5BQ9ULV0 1848 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 NEURL4Q96JN8 1562 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 LOC390937A0A1W2PQ73 354 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 H2AFB2P0C5Z0 115 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 TAS2R60P59551 318 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 ADAM5Q6NVV9 412 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 GSG1LQ6UXU4 331 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 NRSN1Q8IZ57 195 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 BRIX1Q8TDN6 353 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC5A11Q8WWX8 675 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZFP3Q96NJ6 502 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 SEMA6AQ9H2E6 1030 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 MIEF1Q9NQG6 463 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 EMILIN3Q9NT22 766 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 RLIMQ9NVW2 624 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 STARD10Q9Y365 291 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 PPM1DO15297 605 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 B4GALT4O60513 344 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 RETP07949 1114 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF25P17030 456 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 SEC61A1P61619 476 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 TKFCQ3LXA3 575 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 VWA1Q6PCB0 445 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 MFSD7Q6UXD7 560 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 UBAC2Q8NBM4 344 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR2T34Q8NGX1 318 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR2T3Q8NH03 318 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 CIB3Q96Q77 187 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 THAP7Q9BT49 309 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 DPCDQ9BVM2 203 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 ATP10DQ9P241 1426 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 GPR171O14626 319 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 STSP08842 583 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms