RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 TAF11Q15544 211 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 RABL3Q5HYI8 236 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 FHL5Q5TD97 284 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 CPZQ66K79 652 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 MED25Q71SY5 747 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 SZRD1Q7Z422 152 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 HOMEZQ8IX15 550 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 PLPP5Q8NEB5 264 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 C16orf58Q96GQ5 468 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 CCDC115Q96NT0 180 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 PANX1Q96RD7 426 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 CXorf21Q9HAI6 301 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 CLK4Q9HAZ1 481 aaKnown RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 EQTNQ9NQ60 294 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 PAPOLBQ9NRJ5 636 aaKnown RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 TAGLN3Q9UI15 199 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 ERVK-19Q9WJR5 959 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 DSPP15924 2871 aaKnown RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 RNASET2O00584 256 aaKnown RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 OR10H2O60403 315 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 DDAH2O95865 285 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 ATP1B1P05026 303 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 SLC35E2P0CK97 266 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 PRKAR1AP10644 381 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 STT3AP46977 705 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 RASSF2P50749 326 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 PRKAG1P54619 331 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 MTPNP58546 118 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 PCOLCEQ15113 449 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 COX20Q5RI15 118 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 TMEM205Q6UW68 189 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 DRAXINQ8NBI3 349 aaPredicted RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 RP9Q8TA86 221 aaKnown RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 FAM120BQ96EK7 910 aaKnown RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 SLC25A23Q9BV35 468 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 OR8D2Q9GZM6 311 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 GPN2Q9H9Y4 310 aaPredicted RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 WBP11Q9Y2W2 641 aaKnown RBP15.4■□□□□ 0.06
SHOX-201ENST00000334060 MMACHCQ9Y4U1 282 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 TRBV5-3A0A0A0MS03 114 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 RFXANKO14593 260 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 ANGPT2O15123 496 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 UNC5CO95185 931 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 COX6A1P12074 109 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 NTSP30990 170 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 GSTM5P46439 218 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 OR4D2P58180 307 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 Q0VFX4 171 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 CHAF1BQ13112 559 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 ATP1A4Q13733 1029 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 NNATQ16517 81 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 ZNF621Q6ZSS3 439 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 DHDDSQ86SQ9 333 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 ST13P4Q8IZP2 240 aaPredicted RBP15.39■□□□□ 0.05
SHOX-201ENST00000334060 RBM15BQ8NDT2 890 aaKnown RBP15.39■□□□□ 0.05
SHOX-201ENST00000334060 OR11G2Q8NGC1 345 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 STARD8Q92502 1023 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 SLC7A6OSQ96CW6 309 aaPredicted RBP15.39■□□□□ 0.05
SHOX-201ENST00000334060 ELP4Q96EB1 424 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 ZNF578Q96N58 590 aaPredicted RBP15.39■□□□□ 0.05
SHOX-201ENST00000334060 DGAT2Q96PD7 388 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 NUDT9Q9BW91 350 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 PIF1Q9H611 641 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 FAM120CQ9NX05 1096 aaKnown RBP15.39■□□□□ 0.05
SHOX-201ENST00000334060 KCNE3Q9Y6H6 103 aa15.39■□□□□ 0.05
SHOX-201ENST00000334060 ANKRD11Q6UB99 2663 aaPredicted RBP15.39■□□□□ 0.05
SHOX-201ENST00000334060 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 TAF4O00268 1085 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 MAN1A2O60476 641 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 NUDT7P0C024 238 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 RAB40ALP0C0E4 278 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 ACADSP16219 412 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 ATP6V1C1P21283 382 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 CPOXP36551 454 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 EIF2S3P41091 472 aaKnown RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 NFYCQ13952 458 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 KRT72Q14CN4 511 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 PAPD4Q6PIY7 484 aaKnown RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 GALNT10Q86SR1 603 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 NFAM1Q8NET5 270 aaPredicted RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 ADAMTS17Q8TE56 1095 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 ADAMTS18Q8TE60 1221 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 RIT1Q92963 219 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 CTHRC1Q96CG8 243 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 GIMAP5Q96F15 307 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 ZNF764Q96H86 408 aaPredicted RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 LMF1Q96S06 567 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 PRPF18Q99633 342 aaKnown RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 B3GNT4Q9C0J1 378 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 ADAP2Q9NPF8 381 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 ATAD3AQ9NVI7 634 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 TAS2R9Q9NYW1 312 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 MAN2B2Q9Y2E5 1009 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 KLK10O43240 276 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 TNNI3P19429 210 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 GPC1P35052 558 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 GPR143P51810 404 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 MVDP53602 400 aa15.38■□□□□ 0.05
SHOX-201ENST00000334060 RPS15P62841 145 aaKnown RBP15.38■□□□□ 0.05
SHOX-201ENST00000334060 MMEL1Q495T6 779 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms