RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MMAAQ8IVH4 418 aaKnown RBP11.65□□□□□ -0.54
VPS33B-201ENST00000333371 OR52I1Q8NGK6 324 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ARRDC3Q96B67 414 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ST6GAL2Q96JF0 529 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 LRR1Q96L50 414 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 LRRC3BQ96PB8 259 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 TM9SF2Q99805 663 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 MND1Q9BWT6 205 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 TXNL4BQ9NX01 149 aaKnown RBP11.65□□□□□ -0.54
VPS33B-201ENST00000333371 NDUFB11Q9NX14 153 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 NFKBIL1Q9UBC1 381 aaPredicted RBP11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ENOPH1Q9UHY7 261 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 SPIN1Q9Y657 262 aaPredicted RBP11.65□□□□□ -0.54
VPS33B-201ENST00000333371 HYKKA2RU49 373 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ARRDC5A6NEK1 342 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 FRS3O43559 492 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 GSTM5P46439 218 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 KCNJ5P48544 419 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ST8SIA6P61647 398 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 MAP4K2Q12851 820 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 GINS1Q14691 196 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 DHCR24Q15392 516 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF750Q32MQ0 723 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 SYT14P1Q58G82 188 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 KHDRBS2Q5VWX1 349 aaKnown RBP11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF544Q6NX49 715 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 UNC5DQ6UXZ4 953 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 GLCCI1Q86VQ1 547 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 CAMKK1Q8N5S9 505 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 TM9SF4Q92544 642 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 NXPE3Q969Y0 559 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 NUS1Q96E22 293 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 MTERF3Q96E29 417 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF354BQ96LW1 612 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 SLX1AQ9BQ83 275 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 RACGAP1Q9H0H5 632 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 EGLN3Q9H6Z9 239 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ANKRA2Q9H9E1 313 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 C3orf14Q9HBI5 128 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 A4GALTQ9NPC4 353 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 MARK1Q9P0L2 795 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 SEC14L4Q9UDX3 406 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 ICKQ9UPZ9 632 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 MGAT4BQ9UQ53 548 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 KLHL20Q9Y2M5 609 aa11.65□□□□□ -0.54
VPS33B-201ENST00000333371 COL4A3Q01955 1670 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 A0A1W2PQL4 384 aaPredicted RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 A0A1W2PS29 197 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 EPPINO95925 133 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 EPHX1P07099 455 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 ADH5P11766 374 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 C6P13671 934 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 SDC2P34741 201 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 CCT3P49368 545 aaKnown RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 RPS25P62851 125 aaKnown RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 KRR1Q13601 381 aaKnown RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 TBRG1Q3YBR2 411 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 FBXO15Q8NCQ5 510 aaPredicted RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 FLCNQ8NFG4 579 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 OR6T1Q8NGN1 323 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 OR8J1Q8NGP2 316 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 GATAD2BQ8WXI9 593 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 SMPDL3AQ92484 453 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 TMCO6Q96DC7 493 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 NELL2Q99435 816 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 OR51I1Q9H343 314 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 MALT1Q9UDY8 824 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 SSR3Q9UNL2 185 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 TRAPPC4Q9Y296 219 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 RPL36Q9Y3U8 105 aaKnown RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 MEIOCA2RUB1 952 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 FAAHO00519 579 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 LZTS3O60299 673 aaPredicted RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 UGT2B17O75795 530 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 PAPLNO95428 1278 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 RUNX1T1Q06455 604 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 HYAL2Q12891 473 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 NCF4Q15080 339 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 GPR19Q15760 415 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 TMEM201Q5SNT2 666 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 KRT73Q86Y46 540 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 TRIM48Q8IWZ4 208 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 OR4K5Q8NGD3 323 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 OR5P2Q8WZ92 322 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 FYTTD1Q96QD9 318 aaKnown RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 PHOX2BQ99453 314 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 MS4A8Q9BY19 250 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 MAN2C1Q9NTJ4 1040 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 PLEKHB1Q9UF11 243 aaPredicted RBP11.64□□□□□ -0.55
VPS33B-201ENST00000333371 DPP7Q9UHL4 492 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 CMAHPQ9Y471 501 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 SZT2Q5T011 3432 aa11.64□□□□□ -0.55
VPS33B-201ENST00000333371 PI15O43692 258 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 LCMT2O60294 686 aaKnown RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 ADH1CP00326 375 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 ZNF24P17028 368 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 ENDOUP21128 410 aaKnown RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 SOX18P35713 384 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 MRPS15P82914 257 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms