RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TUBA1AQ71U36 451 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 RETREG3Q86VR2 466 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 GOLM1Q8NBJ4 401 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 GINS4Q9BRT9 223 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 LHPPQ9H008 270 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 LIPT1Q9Y234 373 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 SGK494L7N484 410 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 LDB3O75112 727 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 HLA-DPB1P04440 258 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 C7P10643 843 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 CNR2P34972 360 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 PHOSPHO2Q8TCD6 241 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 NUDT8Q8WV74 236 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 TNFAIP8L1Q8WVP5 186 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 RLN3Q8WXF3 142 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 SLC6A17Q9H1V8 727 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 LAMP5Q9UJQ1 280 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 FAM221BA6H8Z2 402 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 RNASET2O00584 256 aaKnown RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 TRIM3O75382 744 aaPredicted RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 RNH1P13489 461 aaKnown RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 DDCP20711 480 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 RPL34P49207 117 aaKnown RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 STARP49675 285 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 TMBIM6P55061 237 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 PITPNAQ00169 270 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 FAM217AQ8IXS0 508 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 FATE1Q969F0 183 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 FUNDC2Q9BWH2 189 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 NMNAT1Q9HAN9 279 aaPredicted RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 ZNF20P17024 532 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 CTGFP29279 349 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 AP3S2P59780 193 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 CHAF1BQ13112 559 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 ANKDD1AQ495B1 522 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 CDKL4Q5MAI5 379 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 ZNF550Q7Z398 422 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 GPAT4Q86UL3 456 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 C1orf216Q8TAB5 229 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 PDLIM5Q96HC4 596 aaKnown RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 SECISBP2Q96T21 854 aaKnown RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 G6PC3Q9BUM1 346 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 PAK1IP1Q9NWT1 392 aaPredicted RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 EXOSC1Q9Y3B2 195 aaKnown RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 TACR1P25103 407 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 MAPK14Q16539 360 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 ZNF367Q7RTV3 350 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 OR6N2Q8NGY6 317 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 ZNF420Q8TAQ5 688 aaPredicted RBP12.36□□□□□ -0.43
VSTM4-202ENST00000332853 MR1Q95460 341 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 WACQ9BTA9 647 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 SLC22A4Q9H015 551 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 RNF121Q9H920 327 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 AGPAT4Q9NRZ5 378 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 ACTR10Q9NZ32 417 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 KCMF1Q9P0J7 381 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 TMEM9Q9P0T7 183 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
VSTM4-202ENST00000332853 A0A1W2PRQ8 180 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 CD8B2A6NJW9 211 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 H0YJX3 145 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 TAPBPO15533 448 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ORC5O43913 435 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 CD8BP10966 210 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 TGFBR2P37173 567 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 SCRN3Q0VDG4 424 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 DEFB133Q30KQ1 61 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ZFYVE21Q9BQ24 234 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 SLC30A2Q9BRI3 323 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 TMEM121BQ9BXQ6 578 aaPredicted RBP12.35□□□□□ -0.43
VSTM4-202ENST00000332853 LMAN1LQ9HAT1 526 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ABI3Q9P2A4 366 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 BTNL2Q9UIR0 455 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ABCG2Q9UNQ0 655 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 A0A1W2PRG6 482 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 TCRBV3S1A0A5B6 114 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 PRSS38A1L453 326 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 B4GALT3O60512 393 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 PVRP15151 417 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ZNF41P51814 821 aaPredicted RBP12.35□□□□□ -0.43
VSTM4-202ENST00000332853 WSCD2Q2TBF2 565 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 C22orf42Q6IC83 251 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 NR4A3Q92570 626 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 GTF2H4Q92759 462 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 PRODH2Q9UF12 536 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 MT-ND5P03915 603 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 RETP07949 1114 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 SLC15A1P46059 708 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 MICAQ29983 383 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 RNF111Q6ZNA4 994 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 HHIPL1Q96JK4 782 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 NECTIN4Q96NY8 510 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 CITED4Q96RK1 184 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 KLHL33A6NCF5 533 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 AHSA1O95433 338 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 PABPC4LP0CB38 370 aaKnown RBP12.35□□□□□ -0.43
VSTM4-202ENST00000332853 SOX2P48431 317 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 HOXC5Q00444 222 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 MEDAGQ5VYS4 303 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms