RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 NUP107P57740 925 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 SMIM11AP58511 58 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 SIM1P81133 766 aaPredicted RBP13.15□□□□□ -0.3
TRAIP-201ENST00000331456 PUM1Q14671 1186 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAIP-201ENST00000331456 CTU2Q2VPK5 515 aaKnown RBP13.15□□□□□ -0.3
TRAIP-201ENST00000331456 GPAT3Q53EU6 434 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 KCTD8Q6ZWB6 473 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 USP53Q70EK8 1073 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 ARL14Q8N4G2 192 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 SLC5A8Q8N695 610 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 C19orf47Q8N9M1 422 aaKnown RBP13.15□□□□□ -0.3
TRAIP-201ENST00000331456 FBLIM1Q8WUP2 373 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 APOBEC4Q8WW27 367 aaKnown RBP13.15□□□□□ -0.3
TRAIP-201ENST00000331456 KAT2AQ92830 837 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 HSPA12BQ96MM6 686 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 OR7D2Q96RA2 312 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 PSD2Q9BQI7 771 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 TBC1D17Q9HA65 648 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 NDRG4Q9ULP0 352 aaKnown RBP13.15□□□□□ -0.3
TRAIP-201ENST00000331456 TMCC3Q9ULS5 477 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 HCN4Q9Y3Q4 1203 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.3
TRAIP-201ENST00000331456 ARRDC5A6NEK1 342 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 DUXAA6NLW8 204 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 H3BSA7 217 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 GALR3O60755 368 aaPredicted RBP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 ABCB7O75027 752 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 AGR2O95994 175 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 CCDC159P0C7I6 412 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 ST6GAL1P15907 406 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 PORP16435 677 aaPredicted RBP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 HNRNPKP61978 463 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 PPP1CAP62136 330 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 OLR1P78380 273 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 CDK5R2Q13319 367 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 GANABQ14697 944 aaKnown RBP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 COLEC12Q5KU26 742 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF438Q7Z4V0 828 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 SDR16C5Q8N3Y7 309 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF566Q969W8 418 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 COL26A1Q96A83 441 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 TMIGD2Q96BF3 282 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 NMD3Q96D46 503 aaKnown RBP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 C16orf58Q96GQ5 468 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 MS4A4EQ96PG1 132 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 ALPK1Q96QP1 1244 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 CSF3RQ99062 836 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 SLC38A3Q99624 504 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 PITX2Q99697 317 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 TRIM45Q9H8W5 580 aaPredicted RBP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 POLR1BQ9H9Y6 1135 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 EQTNQ9NQ60 294 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 PTGFRNQ9P2B2 879 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 RSL24D1Q9UHA3 163 aaKnown RBP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 KCND3Q9UK17 655 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 SLC9A8Q9Y2E8 581 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 MRPS2Q9Y399 296 aaKnown RBP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 NAALAD2Q9Y3Q0 740 aa13.14□□□□□ -0.31
TRAIP-201ENST00000331456 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF860A6NHJ4 632 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 LILRA5A6NI73 299 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 SLC1A7O00341 560 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 ANGPTL1O95841 491 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 RECKO95980 971 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 PROS1P07225 676 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 CPMP14384 443 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 LIMS1P48059 325 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 SNRPNP63162 240 aaKnown RBP13.13□□□□□ -0.31
TRAIP-201ENST00000331456 RPP38P78345 283 aaKnown RBP13.13□□□□□ -0.31
TRAIP-201ENST00000331456 LTB4RQ15722 352 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 B3GNT6Q6ZMB0 384 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 C16orf62Q7Z3J2 963 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 ADAMTS15Q8TE58 950 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 TANKQ92844 425 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 CLDN23Q96B33 292 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 OTUB1Q96FW1 271 aaPredicted RBP13.13□□□□□ -0.31
TRAIP-201ENST00000331456 TUBA1CQ9BQE3 449 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 ANKHQ9HCJ1 492 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 PTTG2Q9NZH5 202 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 NTMQ9P121 344 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 SNX5Q9Y5X3 404 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 PCDH17O14917 1159 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 CASC3O15234 703 aaKnown RBP13.13□□□□□ -0.31
TRAIP-201ENST00000331456 AQP9O43315 295 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 B4GAT1O43505 415 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 CHRM4P08173 479 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 PEX19P40855 299 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 CAPZBP47756 277 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 PPM1FP49593 454 aaPredicted RBP13.13□□□□□ -0.31
TRAIP-201ENST00000331456 NXPH1P58417 271 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 SKP1P63208 163 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 DEF8Q6ZN54 512 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
TRAIP-201ENST00000331456 OR4N5Q8IXE1 308 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 CA13Q8N1Q1 262 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 BPIFB6Q8NFQ5 453 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 VANGL1Q8TAA9 524 aaPredicted RBP13.13□□□□□ -0.31
TRAIP-201ENST00000331456 HRASLS5Q96KN8 279 aa13.13□□□□□ -0.31
TRAIP-201ENST00000331456 TRNT1Q96Q11 434 aaKnown RBP13.13□□□□□ -0.31
TRAIP-201ENST00000331456 IL21RQ9HBE5 538 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms