RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 GLIPR2Q9H4G4 154 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 MKLN1Q9UL63 735 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 SSR3Q9UNL2 185 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 WDR37Q9Y2I8 494 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 MYO9BQ13459 2157 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 CCNKO75909 580 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 PTTG1O95997 202 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 PAK4O96013 591 aaPredicted RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 HBQ1P09105 142 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 ATAT1Q5SQI0 421 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 TMPRSS11AQ6ZMR5 421 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 GET4Q7L5D6 327 aaPredicted RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 OR5K2Q8NHB8 316 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 LINC00615Q96LM1 132 aaPredicted RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 NXF2Q9GZY0 626 aaKnown RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 DDX28Q9NUL7 540 aaKnown RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 YARS2Q9Y2Z4 477 aaKnown RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 SPIN1Q9Y657 262 aaPredicted RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 A3GALT2U3KPV4 340 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 PLXNA2O75051 1894 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 A0A1W2PS29 197 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 PLD2O14939 933 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 ERI3O43414 337 aaKnown RBP13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 CH25HO95992 272 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 SCG5P05408 212 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 CLEC2LP0C7M8 214 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 MMP11P24347 488 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 HOXD12P35452 270 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 RAB8AP61006 207 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 HOXC5Q00444 222 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 CDK3Q00526 305 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 UBE3AQ05086 875 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 OR2G6Q5TZ20 316 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 C22orf42Q6IC83 251 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 TYW3Q6IPR3 259 aaKnown RBP13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 ACSM5Q6NUN0 579 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 NUDT18Q6ZVK8 323 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 ZER1Q7Z7L7 766 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 TRIM69Q86WT6 500 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 GATAD2AQ86YP4 633 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 CAMKK1Q8N5S9 505 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 ZFP41Q8N8Y5 198 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 APOBEC4Q8WW27 367 aaKnown RBP13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 C1GALT1C1Q96EU7 318 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 C16orf58Q96GQ5 468 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC6A18Q96N87 628 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 BARHL1Q9BZE3 327 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 MUTYHQ9UIF7 546 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC9A8Q9Y2E8 581 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 TCF20Q9UGU0 1960 aaKnown RBP13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 OR52A4PA6NMU1 304 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 IL12RB1P42701 662 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 TEKQ02763 1124 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 WSCD2Q2TBF2 565 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 OR4C11Q6IEV9 310 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 NRARPQ7Z6K4 114 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 LINC01555Q8NAE3 123 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 TMIEQ8NEW7 156 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 NEDD4LQ96PU5 975 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 MND1Q9BWT6 205 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 TMEM245Q9H330 911 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 EGLN3Q9H6Z9 239 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC25A19Q9HC21 320 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 MBNL1Q9NR56 388 aaKnown RBP13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC13A4Q9UKG4 626 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 PLEKHM1Q9Y4G2 1056 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 UGT2A1Q9Y4X1 527 aa13.27□□□□□ -0.28
ATP2C1-201ENST00000328560 PGRMC2O15173 223 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 TPD52L2O43399 206 aaKnown RBP13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 COQ9O75208 318 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 SEMA3DO95025 777 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 SNX4O95219 450 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 OXSR1O95747 527 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 RORCP51449 518 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 PCBP4P57723 403 aaKnown RBP13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 COPZ1P61923 177 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 DPTQ07507 201 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 UBE3DQ7Z6J8 389 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 CCDC190Q86UF4 302 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 PIK3R3Q92569 461 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 SLC9A6Q92581 669 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 GPA33Q99795 319 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 CERS4Q9HA82 394 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 A4GNTQ9UNA3 340 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 TRPM6Q9BX84 2022 aa13.27□□□□□ -0.29
ATP2C1-201ENST00000328560 HOXC11O43248 304 aaPredicted RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 KRT8P05787 483 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 DDX5P17844 614 aaKnown RBP13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 NTSP30990 170 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 CASP3P42574 277 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 OR2B6P58173 313 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SMIM11AP58511 58 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 TMEM107Q6UX40 140 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 ZNF765Q7L2R6 523 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 RRM2BQ7LG56 351 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 RHBGQ9H310 441 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SLC35C2Q9NQQ7 365 aa13.26□□□□□ -0.29
ATP2C1-201ENST00000328560 SLC27A6Q9Y2P4 619 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms