RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GHDCQ8N2G8 530 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 OR4D11Q8NGI4 311 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 ARRDC3Q96B67 414 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 METTL2AQ96IZ6 378 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 KCTD7Q96MP8 289 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 HHIPQ96QV1 700 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 DPH7Q9BTV6 452 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC23A2Q9UGH3 650 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 HBQ1P09105 142 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 MAT2AP31153 395 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 MAPK9P45984 424 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 HNRNPFP52597 415 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 WDR5P61964 334 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 QPRTQ15274 297 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 KLHL12Q53G59 568 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC30A6Q6NXT4 461 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 PGBD2Q6P3X8 592 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 SFTPA1Q8IWL2 248 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 RAB42Q8N4Z0 105 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 FLCNQ8NFG4 579 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 OR6T1Q8NGN1 323 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 RGMAQ96B86 450 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 C11orf24Q96F05 449 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 SIGLEC11Q96RL6 698 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 ZDHHC5Q9C0B5 715 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 N6AMT1Q9Y5N5 214 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 FKTNO75072 461 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 NCR1O76036 304 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 SCG5P05408 212 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 CCNYL3P0C7X3 344 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 DOC2BQ14184 412 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 CAMKMTQ7Z624 323 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 ADGRF3Q8IZF5 1079 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 TMEM145Q8NBT3 493 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 TM4SF18Q96CE8 201 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 RNFT2Q96EX2 444 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 PDXPQ96GD0 296 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 FAM46AQ96IP4 442 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC38A2Q96QD8 506 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 HOXD1Q9GZZ0 328 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 KLHL1Q9NR64 748 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 GIMAP4Q9NUV9 329 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 FBXL12Q9NXK8 326 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 PCYT1BQ9Y5K3 369 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 A0A1B0GVC2 190 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 FAM240BA0A1B0GVZ2 78 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 A6NIN4 97 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 PAK4O96013 591 aaPredicted RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ADRB3P13945 408 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 GABRB1P18505 474 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 MMP11P24347 488 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 GPR4P46093 362 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 RGS8P57771 180 aaPredicted RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 RPS25P62851 125 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 CDC20Q12834 499 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF547Q8IVP9 402 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF557Q8N988 423 aaPredicted RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ANKRD53Q8N9V6 530 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ATP6V1C2Q8NEY4 427 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 C16orf58Q96GQ5 468 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF354BQ96LW1 612 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 FCRL4Q96PJ5 515 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 CDCA4Q9BXL8 241 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 TTTY10Q9BZA0 68 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 BARHL1Q9BZE3 327 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 GPSM3Q9Y4H4 160 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 CACNA1CQ13936 2221 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 C2orf92A0A1B0GVN3 265 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 IGLON5A6NGN9 336 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 OR52A4PA6NMU1 304 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 NPIPB8E9PQR5 432 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 HMGN4O00479 90 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 RAB36O95755 333 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 HMGN2P05204 90 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ETV5P41161 510 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 GIPRP48546 466 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ETV1P50549 477 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC35F1Q5T1Q4 408 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 PLEKHM3Q6ZWE6 761 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 GPR155Q7Z3F1 870 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 MARCH9Q86YJ5 346 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 LAS2Q8IYD9 372 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 PPP1R16AQ96I34 528 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 FYTTD1Q96QD9 318 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 SGPP1Q9BX95 441 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ZBP1Q9H171 429 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 PTGFRNQ9P2B2 879 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 HCN2Q9UL51 889 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 SNX7Q9UNH6 387 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 UNC80Q8N2C7 3258 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 MEIOCA2RUB1 952 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 CD8B2A6NJW9 211 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 SNTNA6NMZ2 147 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ISM1B1AKI9 464 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 PRRT4C9JH25 899 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 CXCL10P02778 98 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 CD8BP10966 210 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 CEBPBP17676 345 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 DDX5P17844 614 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms