RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ATXN7L3Q14CW9 347 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM200AQ86VY9 491 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 NRROSQ86YC3 692 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ADAMTS15Q8TE58 950 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ACOT11Q8WXI4 607 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CRB3Q9BUF7 120 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF700Q9H0M5 742 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 NOSIPQ9Y314 301 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 PCDHA9Q9Y5H5 950 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 PCDHAC2Q9Y5I4 1007 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 PLXNA4Q9HCM2 1894 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 POM121CA8CG34 1229 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 RASGEF1BQ0VAM2 473 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 GRIK5Q16478 980 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 USP41Q3LFD5 358 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 ADPRMQ3LIE5 342 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 C9orf64Q5T6V5 341 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MAVSQ7Z434 540 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 LSMEM2Q8N112 164 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 ASB13Q8WXK3 278 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 PIGMQ9H3S5 423 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 HACL1Q9UJ83 578 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 DNAJC15Q9Y5T4 150 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MEN1O00255 615 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 HOXA2O43364 376 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 TP53P04637 393 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 LGALS2P05162 132 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 YBEYP58557 167 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 B2MP61769 119 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MRPS31Q92665 395 aaKnown RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 FKBP10Q96AY3 582 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MRTO4Q9UKD2 239 aaKnown RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SH2B3Q9UQQ2 575 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SPATA31A1Q5TZJ5 1347 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 OR2A25A4D2G3 310 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 GTPBP1O00178 669 aaKnown RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SCN2BO60939 215 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 PIGRP01833 764 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 UQCRC2P22695 453 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MPIP34949 423 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MAGEA3P43357 314 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 GPR1P46091 355 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 ST3GAL3Q11203 375 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 FAM214AQ32MH5 1076 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 VTCN1Q7Z7D3 282 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF565Q8N9K5 539 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF251Q9BRH9 671 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 PINK1Q9BXM7 581 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 TTC24A2A3L6 582 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SHOXO15266 292 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SLC16A6O15403 523 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SSX4O60224 188 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SMIM6P0DI80 62 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 VAMP2P63027 116 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 OLIG2Q13516 323 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 PROKR2Q8NFJ6 384 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 GNPDA2Q8TDQ7 276 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SLC41A3Q96GZ6 507 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SAMD11Q96NU1 681 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 DEFB129Q9H1M3 183 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 OSBPL2Q9H1P3 480 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SMCO4Q9NRQ5 59 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SAGE1Q9NXZ1 904 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 LAMP5Q9UJQ1 280 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 ACTL7AQ9Y615 435 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 IGKV6D-41A0A0C4DH26 115 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SMLR1H3BR10 107 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 IFNA2P01563 188 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 OPN1SWP03999 348 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 HTR1AP08908 422 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 GPX3P22352 226 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 WEE1P30291 646 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 DPP6P42658 865 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 TRAM2Q15035 370 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 CD276Q5ZPR3 534 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SGCDQ92629 289 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 KCNJ9Q92806 393 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SHISA4Q96DD7 197 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 CNN2Q99439 309 aaKnown RBP6.75□□□□□ -1.33
SMC1A-201ENST00000322213 DOK1Q99704 481 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MYOCQ99972 504 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 MAGEH1Q9H213 219 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SPNS1Q9H2V7 528 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 A0A1W2PRQ8 180 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SLC35F4A4IF30 521 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 EFCAB7A8K855 629 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 RDH16O75452 317 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 SBK2P0C263 348 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 PGAM2P15259 253 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 ALAS2P22557 587 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 CD34P28906 385 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 TLE2Q04725 743 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 RAB40BQ12829 278 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 TUSC3Q13454 348 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM132BQ14DG7 1078 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 FAM209BQ5JX69 171 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 OR4F3Q6IEY1 312 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM205Q6UW68 189 aa6.75□□□□□ -1.33
SMC1A-201ENST00000322213 GAREM2Q75VX8 874 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms