RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 TSC22D4Q9Y3Q8 395 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 MMACHCQ9Y4U1 282 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 TGP01266 2768 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 EML6Q6ZMW3 1958 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 STX16-NPEPL1H3BU86 382 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 WWP2O00308 870 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 STX16O14662 325 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 RFPL3SP0C7P2 107 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 PCNAP12004 261 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 PIK3CBP42338 1070 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 TRPC1P48995 793 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 MTTPP55157 894 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 RAB38P57729 211 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 SRSF2Q01130 221 aaKnown RBP12.09□□□□□ -0.47
SYCN-201ENST00000318438 GTF2H2Q13888 395 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 RUNX2Q13950 521 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 RCN2Q14257 317 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 TMEM35AQ53FP2 167 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 GTF2H2CQ6P1K8 395 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 TIFABQ6ZNK6 161 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 LUZP2Q86TE4 346 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 GSPT2Q8IYD1 628 aaKnown RBP12.09□□□□□ -0.47
SYCN-201ENST00000318438 PTGR2Q8N8N7 351 aaPredicted RBP12.09□□□□□ -0.47
SYCN-201ENST00000318438 NCLNQ969V3 563 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 SCYL1Q96KG9 808 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 F2RL3Q96RI0 385 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 RASL10BQ96S79 203 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 MRPL57Q9BQC6 102 aaKnown RBP12.09□□□□□ -0.47
SYCN-201ENST00000318438 PIGQQ9BRB3 760 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 ROGDIQ9GZN7 287 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 MRPL46Q9H2W6 279 aaKnown RBP12.09□□□□□ -0.47
SYCN-201ENST00000318438 ACTR8Q9H981 624 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 DAPP1Q9UN19 280 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 PCDHGB3Q9Y5G1 929 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 CLDN16Q9Y5I7 305 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.09□□□□□ -0.47
SYCN-201ENST00000318438 ABCA1O95477 2261 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 SVEP1Q4LDE5 3571 aa12.09□□□□□ -0.47
SYCN-201ENST00000318438 IQANK1A0A1B0GTG1 560 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 SYNDIG1LA6NDD5 238 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 LRRC14BA6NHZ5 514 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 DEFB108AA8MXU0 73 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 H0YIV9 168 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 TLX2O43763 284 aaPredicted RBP12.08□□□□□ -0.48
SYCN-201ENST00000318438 SMIM24O75264 130 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 SOX30O94993 753 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 SCELO95171 688 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 CCL3P10147 92 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 CTSSP25774 331 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 CERS1P27544 350 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 GPR143P51810 404 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 LIM2P55344 173 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 SLC29A2Q14542 456 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 TERF2Q15554 542 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 TEX35Q5T0J7 233 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 RTL4Q6ZR62 310 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 GOLGA7Q7Z5G4 137 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 LCA5Q86VQ0 697 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 MYLK4Q86YV6 388 aaPredicted RBP12.08□□□□□ -0.48
SYCN-201ENST00000318438 SCUBE1Q8IWY4 988 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 L3MBTL4Q8NA19 623 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 HUS1BQ8NHY5 278 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 NEIL3Q8TAT5 605 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 REPS1Q96D71 796 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 HSPBAP1Q96EW2 488 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 PIK3IP1Q96FE7 263 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 CMTM7Q96FZ5 175 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 VMP1Q96GC9 406 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 CCDC77Q9BR77 488 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 TBCDQ9BTW9 1192 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 ZNF703Q9H7S9 590 aaPredicted RBP12.08□□□□□ -0.48
SYCN-201ENST00000318438 IPPKQ9H8X2 491 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 PRDM7Q9NQW5 492 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 PNO1Q9NRX1 252 aaKnown RBP12.08□□□□□ -0.48
SYCN-201ENST00000318438 PSMC3IPQ9P2W1 217 aaPredicted RBP12.08□□□□□ -0.48
SYCN-201ENST00000318438 PPIEQ9UNP9 301 aaKnown RBP12.08□□□□□ -0.48
SYCN-201ENST00000318438 MRPS33Q9Y291 106 aaKnown RBP12.08□□□□□ -0.48
SYCN-201ENST00000318438 TESMINQ9Y4I5 508 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 ATG4BQ9Y4P1 393 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 PCDHGA11Q9Y5H2 935 aa12.08□□□□□ -0.48
SYCN-201ENST00000318438 AHRRA9YTQ3 701 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 CD5LO43866 347 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 ZFAND5O76080 213 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 TGFB1P01137 390 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 FAM157CP0CG43 387 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 HIST1H1TP22492 207 aaPredicted RBP12.07□□□□□ -0.48
SYCN-201ENST00000318438 PPP2R1BP30154 601 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 OPRM1P35372 400 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 PIGAP37287 484 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 HSD17B7P56937 341 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 PHEXP78562 749 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 KHDRBS2Q5VWX1 349 aaKnown RBP12.07□□□□□ -0.48
SYCN-201ENST00000318438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.07□□□□□ -0.48
SYCN-201ENST00000318438 ZNF793Q6ZN11 406 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 UBE3DQ7Z6J8 389 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 ZNF595Q8IYB9 648 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 MEIOBQ8N635 442 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 FAM47BQ8NA70 645 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms