RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 DUS1LQ6P1R4 473 aaKnown RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 TMIEQ8NEW7 156 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 SLC12A9Q9BXP2 914 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 SRA1Q9HD15 236 aaKnown RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 TAS2R10Q9NYW0 307 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 ADAM18Q9Y3Q7 739 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 MRPL3P09001 348 aaKnown RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 ZNF43P17038 809 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 SOX2P48431 317 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 UNC50Q53HI1 259 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 DPPA4Q7L190 304 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 TMEM135Q86UB9 458 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 UEVLDQ8IX04 471 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 OR8S1Q8NH09 359 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 FBXL8Q96CD0 374 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 NR0B1P51843 470 aaKnown RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 RIDAP52758 137 aaKnown RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 WNT7BP56706 349 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 C3P1Q6ZMU1 363 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 MYH7P12883 1935 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 NAV1Q8NEY1 1877 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 A6NL46 340 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 M0R129 80 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 SOCS2O14508 198 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 PHYHO14832 338 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 AK4P27144 223 aaPredicted RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 TUBA1BP68363 451 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 TUBA4AP68366 448 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 BNIP3Q12983 259 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 CHRFAM7AQ494W8 412 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 LRFN4Q6PJG9 635 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 ENPP6Q6UWR7 440 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 TUBA1AQ71U36 451 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 ZNF709Q8N972 641 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 CCDC120Q96HB5 630 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 KLF16Q9BXK1 252 aaPredicted RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 MCOLN1Q9GZU1 580 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 C12orf4Q9NQ89 552 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 PARPBPQ9NWS1 579 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 ZNF69Q9UC07 566 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 KLHL21Q9UJP4 597 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 FARSAQ9Y285 508 aaKnown RBP13.63□□□□□ -0.23
TRIM25-201ENST00000316881 SPEF1Q9Y4P9 236 aa13.63□□□□□ -0.23
TRIM25-201ENST00000316881 SCAMP2O15127 329 aaKnown RBP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 RPS3P23396 243 aaKnown RBP eCLIP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 AP2S1P53680 142 aaPredicted RBP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 ZNF33BQ06732 778 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 SPRED3Q2MJR0 410 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 FOXRED2Q8IWF2 684 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 OR8K3Q8NH51 312 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 CREB3L4Q8TEY5 395 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 ARL5BQ96KC2 179 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 ALOXE3Q9BYJ1 711 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 MTHFD2LQ9H903 347 aaPredicted RBP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 RDH8Q9NYR8 311 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 KCNIP3Q9Y2W7 256 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 NOP16Q9Y3C1 178 aaKnown RBP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 HCFC2Q9Y5Z7 792 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 E2F3O00716 465 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 GJA5P36382 358 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 TUBB3Q13509 450 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 RAB11FIP2Q7L804 512 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 PMF1-BGLAPU3KQ54 211 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 A0A0G2JPF8 293 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 HNRNPCL3B7ZW38 293 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 MT-ND2P03891 347 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 HNRNPCL4P0DMR1 293 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 PRKACGP22612 351 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 GCGRP47871 477 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 SLC7A9P82251 487 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 PTCRAQ6ISU1 281 aaPredicted RBP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 TMED4Q7Z7H5 227 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 TRMT2BQ96GJ1 504 aaKnown RBP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 FBXL20Q96IG2 436 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 ACTRT3Q9BYD9 372 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 RXFP3Q9NSD7 469 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 ADAMTS6Q9UKP5 1117 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 NENFQ9UMX5 172 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 SH2B3Q9UQQ2 575 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 GNRHRP30968 328 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 RBMXP38159 391 aaKnown RBP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 CDKN2DP55273 166 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 EFR3AQ14156 821 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 RAB6CQ53S08 254 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 ASRGL1Q7L266 308 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 NLGN4YQ8NFZ3 816 aaPredicted RBP13.62□□□□□ -0.23
TRIM25-201ENST00000316881 RAB6CQ9H0N0 254 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 HSFX1Q9UBD0 423 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 BAIAP2Q9UQB8 552 aa13.62□□□□□ -0.23
TRIM25-201ENST00000316881 MYH3P11055 1940 aa13.61□□□□□ -0.23
TRIM25-201ENST00000316881 ATF6P18850 670 aa13.61□□□□□ -0.23
TRIM25-201ENST00000316881 RNF144AP50876 292 aaPredicted RBP13.61□□□□□ -0.23
TRIM25-201ENST00000316881 EPHA4P54764 986 aa13.61□□□□□ -0.23
TRIM25-201ENST00000316881 MLLT10P55197 1068 aa13.61□□□□□ -0.23
TRIM25-201ENST00000316881 CLDN8P56748 225 aa13.61□□□□□ -0.23
TRIM25-201ENST00000316881 EEF1A1P5Q5VTE0 462 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms