RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TMCC3Q9ULS5 477 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 CORINQ9Y5Q5 1042 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 FEZF1A0PJY2 475 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 PCDH17O14917 1159 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 TBX6O95947 436 aaPredicted RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 LCKP06239 509 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 BCHEP06276 602 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 ACTR1BP42025 376 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 DHPSP49366 369 aaPredicted RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 ACTR1AP61163 376 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 RACK1P63244 317 aaKnown RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 COLEC12Q5KU26 742 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 TNFAIP8L2Q6P589 184 aaPredicted RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 C6orf120Q7Z4R8 191 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 CENPSQ8N2Z9 138 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 STX19Q8N4C7 294 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 HORMAD2Q8N7B1 307 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 LINC01555Q8NAE3 123 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 OR9Q2Q8NGE9 314 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 C1orf216Q8TAB5 229 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 DYNC2LI1Q8TCX1 351 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 LGALS12Q96DT0 336 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 ALPK1Q96QP1 1244 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 ZNF607Q96SK3 696 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 NRTNQ99748 197 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 RAB11FIP5Q9BXF6 653 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 MIR1-1HGQ9H1L0 117 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 ACSS1Q9NUB1 689 aaPredicted RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 R4GN57 208 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 A0A1W2PPV9 198 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 EFCAB9A8MZ26 197 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 KPNA4O00629 521 aaPredicted RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 CLEC3AO75596 197 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 SULT1C4O75897 302 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 WNT1P04628 370 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 HNRNPCP07910 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
VRK3-201ENST00000316763 CBLP22681 906 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 PSMB5P28074 263 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 CD38P28907 300 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 FRKP42685 505 aaPredicted RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 CLK1P49759 484 aaKnown RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 PCBP4P57723 403 aaKnown RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 TUBA1BP68363 451 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 ILF3Q12906 894 aaKnown RBP eCLIP13.39□□□□□ -0.27
VRK3-201ENST00000316763 HSPB3Q12988 150 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 GANABQ14697 944 aaKnown RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 TUBA1AQ71U36 451 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 PARGQ86W56 976 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 AQP11Q8NBQ7 271 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 SLC38A5Q8WUX1 472 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 GTPBP3Q969Y2 492 aaKnown RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 EXOSC8Q96B26 276 aaKnown RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 ZHX1-C8orf76Q96EF9 292 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 CRELD1Q96HD1 420 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 COL21A1Q96P44 957 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 TCEAL2Q9H3H9 227 aaPredicted RBP13.39□□□□□ -0.27
VRK3-201ENST00000316763 KIR3DX1Q9H7L2 352 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 FBXO8Q9NRD0 319 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 ZNF226Q9NYT6 803 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 COLEC10Q9Y6Z7 277 aa13.39□□□□□ -0.27
VRK3-201ENST00000316763 LRP4O75096 1905 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 SH3D21A4FU49 640 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 F3P13726 295 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 DRD2P14416 443 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 NDUFS1P28331 727 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 ALDH4A1P30038 563 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 PKLRP30613 574 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 TGFBR2P37173 567 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 CTSKP43235 329 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 CCT3P49368 545 aaKnown RBP13.38□□□□□ -0.27
VRK3-201ENST00000316763 RAB28P51157 221 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 SMIM11AP58511 58 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 TCF15Q12870 199 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 ATP1A4Q13733 1029 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 MLC1Q15049 377 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 DUSP7Q16829 419 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 TIGD6Q17RP2 521 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 WDR45BQ5MNZ6 344 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 LYSMD4Q5XG99 296 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 OR4C11Q6IEV9 310 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 ADCK2Q7Z695 626 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 CCDC103Q8IW40 242 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 SLC44A2Q8IWA5 706 aaPredicted RBP13.38□□□□□ -0.27
VRK3-201ENST00000316763 PRSS33Q8NF86 280 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 OR52E1Q8NGJ3 308 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 OR2L8Q8NGY9 312 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 C9orf43Q8TAL5 461 aaPredicted RBP13.38□□□□□ -0.27
VRK3-201ENST00000316763 TMEM19Q96HH6 336 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 FAIM2Q9BWQ8 316 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 DDX31Q9H8H2 851 aaKnown RBP13.38□□□□□ -0.27
VRK3-201ENST00000316763 SLAMF7Q9NQ25 335 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 CLN6Q9NWW5 311 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 ZNF624Q9P2J8 865 aaPredicted RBP13.38□□□□□ -0.27
VRK3-201ENST00000316763 KCND3Q9UK17 655 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 HEATR5BQ9P2D3 2071 aa13.38□□□□□ -0.27
VRK3-201ENST00000316763 EFCAB10A6NFE3 127 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 SERPINB7O75635 380 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 OXSR1O95747 527 aaPredicted RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 POU2F1P14859 743 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms