RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 C9orf43Q8TAL5 461 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 NEIL3Q8TAT5 605 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 UCN3Q969E3 161 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 NELL2Q99435 816 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 SEC14L4Q9UDX3 406 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 HCN2Q9UL51 889 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 MGAT4AQ9UM21 535 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 RTTNQ86VV8 2226 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 POM121CA8CG34 1229 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 ADH5P11766 374 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 C6P13671 934 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 IMPA1P29218 277 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 CBLBQ13191 982 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF761Q86XN6 746 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 OR4N5Q8IXE1 308 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 VWA5B2Q8N398 1253 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 GALNT6Q8NCL4 622 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TFGQ92734 400 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 RIT1Q92963 219 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 SLC29A3Q9BZD2 475 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 MAGIXQ9H6Y5 334 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 NMNAT1Q9HAN9 279 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 ENAMQ9NRM1 1142 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 SLC6A14Q9UN76 642 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3DA0A087WVF3 549 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3IA0A087WXS9 549 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3EA0A087X179 549 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3KA0A087X1G2 549 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3FA6NER0 549 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3LB9A6J9 549 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 GNB5O14775 395 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 LRRTM2O43300 516 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 HPGDSO60760 199 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 H1F0P07305 194 aaKnown RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3HP0C7X1 549 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 NRIP1P48552 1158 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF385BQ569K4 471 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3GQ6DHY5 549 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3CQ6IPX1 549 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TBC1D3Q8IZP1 549 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 GEMIN6Q8WXD5 167 aaKnown RBP12.03□□□□□ -0.48
RETREG3-201ENST00000309428 NUS1Q96E22 293 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 TRPS1Q9UHF7 1281 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 PSORS1C1Q9UIG5 152 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 CORO2BQ9UQ03 480 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF236Q9UL36 1845 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 GVINP1Q7Z2Y8 2422 aa12.03□□□□□ -0.48
RETREG3-201ENST00000309428 A0A1W2PP55 124 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 ITGAMP11215 1152 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 PPM1AP35813 382 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 ASMTP46597 345 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 SLC5A12Q1EHB4 618 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 BICRALQ6AI39 1079 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 LIPIQ6XZB0 460 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF367Q7RTV3 350 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 RBM45Q8IUH3 476 aaKnown RBP12.02□□□□□ -0.48
RETREG3-201ENST00000309428 MEIOBQ8N635 442 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 HMGB4Q8WW32 186 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 YIPF6Q96EC8 236 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 CMTM7Q96FZ5 175 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 KXD1Q9BQD3 176 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 MKRN2Q9H000 416 aaKnown RBP12.02□□□□□ -0.48
RETREG3-201ENST00000309428 NUDT15Q9NV35 164 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 QPCTLQ9NXS2 382 aa12.02□□□□□ -0.48
RETREG3-201ENST00000309428 SPTBN2O15020 2390 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 GPX5O75715 221 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 KCNK5O95279 499 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 MRPL3P09001 348 aaKnown RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 JUPP14923 745 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 ERP29P30040 261 aaKnown RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 DSTNP60981 165 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 GPLD1P80108 840 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 TBCEQ15813 527 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 LYPLAL1Q5VWZ2 237 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 SLC30A8Q8IWU4 369 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 TMEFF1Q8IYR6 380 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 C10orf53Q8N6V4 93 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 NLGN4YQ8NFZ3 816 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 MND1Q9BWT6 205 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 ANKHQ9HCJ1 492 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 SLC52A3Q9NQ40 469 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 ZCCHC3Q9NUD5 404 aaKnown RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 ZNF282Q9UDV7 671 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 OTOL1A6NHN0 477 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 PRR35P0CG20 571 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 PCMT1P22061 227 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 CBLP22681 906 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 CXCR2P25025 360 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 BMPR1AP36894 532 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 OR3A3P47888 321 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 MAZP56270 477 aaKnown RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 CAMK1Q14012 370 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 KDM4DQ6B0I6 523 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 FAM109BQ6ICB4 259 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-201ENST00000309428 HSDL2Q6YN16 418 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 PDZD3Q86UT5 571 aa12.02□□□□□ -0.49
RETREG3-201ENST00000309428 C17orf64Q86WR6 236 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms