RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZCCHC18P0CG32 403 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 ANXA8P13928 327 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 ACVR2AP27037 513 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 ID4P47928 161 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 GABREP78334 506 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 REEP5Q00765 189 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 TLR1Q15399 786 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 CCSMST1Q4G0I0 132 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 SFT2D3Q587I9 215 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 ABRAXAS1Q6UWZ7 409 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 IL20RBQ6UXL0 311 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 SLCO4C1Q6ZQN7 724 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 KMT5CQ86Y97 462 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 CENPNQ96H22 339 aaPredicted RBP8.76□□□□□ -1.01
PTPRE-202ENST00000306042 UBXN10Q96LJ8 280 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 CIB1Q99828 191 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 PCDHAC1Q9H158 963 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 CCDC86Q9H6F5 360 aaKnown RBP8.76□□□□□ -1.01
PTPRE-202ENST00000306042 SLC23A2Q9UGH3 650 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 ANTXRLA6NF34 631 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 LILRA5A6NI73 299 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 TP73O15350 636 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 RNF13O43567 381 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 NUDT21O43809 227 aaKnown RBP8.76□□□□□ -1.01
PTPRE-202ENST00000306042 ABCB7O75027 752 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 APOA1P02647 267 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 DBIP07108 87 aaKnown RBP8.76□□□□□ -1.01
PTPRE-202ENST00000306042 GSTM3P21266 225 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 GDF1P27539 372 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 TEAD1P28347 426 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 EPHA4P54764 986 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 BNIP1Q12981 228 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 UGT3A2Q3SY77 523 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 CYBRD1Q53TN4 286 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 ATG14Q6ZNE5 492 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 HDDC2Q7Z4H3 204 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 SVOPLQ8N434 492 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF671Q8TAW3 534 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 DUSP15Q9H1R2 295 aaPredicted RBP8.76□□□□□ -1.01
PTPRE-202ENST00000306042 TCEAL2Q9H3H9 227 aaPredicted RBP8.76□□□□□ -1.01
PTPRE-202ENST00000306042 SACM1LQ9NTJ5 587 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 COQ3Q9NZJ6 369 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 DNAJB9Q9UBS3 223 aa8.76□□□□□ -1.01
PTPRE-202ENST00000306042 BOKQ9UMX3 212 aaPredicted RBP8.76□□□□□ -1.01
PTPRE-202ENST00000306042 RBBP6Q7Z6E9 1792 aaKnown RBP8.76□□□□□ -1.01
PTPRE-202ENST00000306042 WWP2O00308 870 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ARPC2O15144 300 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 IFI30P13284 250 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 CPMP14384 443 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 CSNK1G2P78368 415 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 MRPS35P82673 323 aaKnown RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 HSF2Q03933 536 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 FOLH1Q04609 750 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ACVR1Q04771 509 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 MTFR2Q6P444 385 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 TMPRSS11AQ6ZMR5 421 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 FAM83HQ6ZRV2 1179 aaPredicted RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 PIGWQ7Z7B1 504 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 KIAA0907Q7Z7F0 614 aaPredicted RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 WDR5BQ86VZ2 330 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 CLECL1Q8IZS7 167 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 GALNT6Q8NCL4 622 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 CREB3L4Q8TEY5 395 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ACPTQ9BZG2 426 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 MYNNQ9NPC7 610 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 C8orf4Q9NR00 106 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 RASSF1Q9NS23 344 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 SEMA4GQ9NTN9 838 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 TMEM5Q9Y2B1 443 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 CABIN1Q9Y6J0 2220 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 TSPAN11A1L157 253 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 FOXE1O00358 373 aaPredicted RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 PROM1O43490 865 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ADAM23O75077 832 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 HMGN1P05114 100 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ST13P50502 369 aaKnown RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ELF3P78545 371 aaPredicted RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 KCNC4Q03721 635 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 DGCR6Q14129 220 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 MPP2Q14168 576 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 NPTX1Q15818 432 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 NEDD8Q15843 81 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 INAQ16352 499 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 TIMM50Q3ZCQ8 353 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 GUSBP11Q6P575 273 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 LGI4Q8N135 537 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF740Q8NDX6 193 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 OR10G2Q8NGC3 310 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 KCNE4Q8WWG9 221 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 HSH2DQ96JZ2 352 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 BMFQ96LC9 184 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 C11orf16Q9NQ32 467 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ADAM30Q9UKF2 790 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ADAM29Q9UKF5 820 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 AQP12BA6NM10 295 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 CLPTM1O96005 669 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ST6GAL1P15907 406 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 CBLP22681 906 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 GFERP55789 205 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms