RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 TMEM107Q6UX40 140 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TMIGD1Q6UXZ0 262 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 KLBQ86Z14 1044 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 SCAMP5Q8TAC9 235 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 PAQR8Q8TEZ7 354 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 HSH2DQ96JZ2 352 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 RAB9BQ9NP90 201 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ATG4BQ9Y4P1 393 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 UBFD1O14562 309 aaKnown RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 NPHS1O60500 1241 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 OR2B3O76000 313 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 LIPCP11150 499 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF43P17038 809 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 CRYZQ08257 329 aaKnown RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 PTCHD3Q3KNS1 767 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 POTEKPQ9BYX7 375 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 HRASLSQ9HDD0 168 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 MYH15Q9Y2K3 1946 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 SH2D7A6NKC9 451 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF821O75541 412 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TUSC2O75896 110 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TFPTP0C1Z6 253 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 GPR4P46093 362 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 UFM1P61960 85 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 MELKQ14680 651 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TREML2Q5T2D2 321 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 FCRLBQ6BAA4 426 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF765Q7L2R6 523 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 SPTSSAQ969W0 71 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 SENP5Q96HI0 755 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 POMPQ9Y244 141 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 C2orf78A6NCI8 922 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 H3BML4 177 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 PCDH17O14917 1159 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 CPNE8Q86YQ8 564 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 MYLIPQ8WY64 445 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 PTTG2Q9NZH5 202 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TMEM9Q9P0T7 183 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 EXOSC1Q9Y3B2 195 aaKnown RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TMEM88BA6NKF7 163 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 DCNP07585 359 aaKnown RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 HOXA1P49639 335 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TMEM201Q5SNT2 666 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TICAM1Q8IUC6 712 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TMEM104Q8NE00 496 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TERB2Q8NHR7 220 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 CCDC74BQ96LY2 380 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 SMIM35A0A1B0GVV1 85 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF891A8MT65 544 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TXNDC12O95881 172 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 PLA2G7Q13093 441 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 FGL2Q14314 439 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 DPY19L1Q2PZI1 675 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 PDLIM3Q53GG5 364 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 LEG1Q6P5S2 330 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF836Q6ZNA1 936 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ADGRA1Q86SQ6 560 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 NUP43Q8NFH3 380 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 SLC5A11Q8WWX8 675 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 OR5B2Q96R09 309 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 WWTR1Q9GZV5 400 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 SIDT1Q9NXL6 827 aaKnown RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ZMAT5Q9UDW3 170 aaKnown RBP13.63□□□□□ -0.23
HIPK3-201ENST00000303296 WNT6Q9Y6F9 365 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 FAM171A2A8MVW0 826 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 VEGFDO43915 354 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 CDK1P06493 297 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 SLAMF1Q13291 335 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 TECPR1Q7Z6L1 1165 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 LINC00471Q8N535 108 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 CANT1Q8WVQ1 401 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 REEP6Q96HR9 211 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 KCNJ16Q9NPI9 418 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 ARMC1Q9NVT9 282 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 PPP2CAP67775 309 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 CYBRD1Q53TN4 286 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF648Q5T619 568 aaPredicted RBP13.62□□□□□ -0.23
HIPK3-201ENST00000303296 KCNIP4Q6PIL6 250 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 SGPP2Q8IWX5 399 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 DDIT4LQ96D03 193 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 OR4K3Q96R72 315 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 PATZ1Q9HBE1 687 aaKnown RBP13.62□□□□□ -0.23
HIPK3-201ENST00000303296 NCANO14594 1321 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 EDDM13A0A1B0GTR0 161 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 FEZF1A0PJY2 475 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 D6RAR5 112 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 LAMTOR5O43504 91 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 SYT7O43581 403 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 NXPH3O95157 252 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 MT-ND2P03891 347 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 ELK4P28324 431 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 HOXA9P31269 272 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 VEGFCP49767 419 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 GTF2BQ00403 316 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 FPGSQ05932 587 aa13.62□□□□□ -0.23
HIPK3-201ENST00000303296 DCP2Q8IU60 420 aaKnown RBP13.62□□□□□ -0.23
HIPK3-201ENST00000303296 INTS12Q96CB8 462 aaKnown RBP13.62□□□□□ -0.23
HIPK3-201ENST00000303296 RBMXL1Q96E39 390 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms