RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 C2orf42Q9NWW7 574 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 KLHL42Q9P2K6 505 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 THAP10Q9P2Z0 257 aaPredicted RBP12.8□□□□□ -0.36
TTC39B-201ENST00000297615 CORO2BQ9UQ03 480 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 SLC27A6Q9Y2P4 619 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 PCDHGA2Q9Y5H1 932 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 A0A1W2PPV9 198 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 PRAMEF27A3QJZ7 478 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 FFAR1O14842 300 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 TFECO14948 347 aaPredicted RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 HMGN2P05204 90 aaKnown RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 RPLP0P05388 317 aaKnown RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 CEACAM5P06731 702 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 ANXA8P13928 327 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 PPIBP23284 216 aaKnown RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 IGFALSP35858 605 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 MC3RP41968 323 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 PLEKHG7Q6ZR37 379 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 PARGQ86W56 976 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 OR2A1Q8NGT9 310 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 GLIPR2Q9H4G4 154 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 PHPT1Q9NRX4 125 aaPredicted RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 POU2F3Q9UKI9 436 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 CARD8Q9Y2G2 431 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 POFUT2Q9Y2G5 429 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 PADI2Q9Y2J8 665 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 IFT52Q9Y366 437 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 HCN4Q9Y3Q4 1203 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 DNMT3AQ9Y6K1 912 aaPredicted RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 CACNA1EQ15878 2313 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 FCMRO60667 390 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 FGF19O95750 216 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 BSGP35613 385 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 PIK3CBP42338 1070 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 FAM92BQ6ZTR7 304 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 OXR1Q8N573 874 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 IPCEF1Q8WWN9 437 aaPredicted RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 GEMIN6Q8WXD5 167 aaKnown RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 OR1E3Q8WZA6 343 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 SMPDL3AQ92484 453 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 LRIG1Q96JA1 1093 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 BHLHE41Q9C0J9 482 aaPredicted RBP12.79□□□□□ -0.36
TTC39B-201ENST00000297615 SERHL2Q9H4I8 314 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 CNIH4Q9P003 139 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 CLCA2Q9UQC9 943 aa12.79□□□□□ -0.36
TTC39B-201ENST00000297615 A0A1W2PR48 441 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 K7EQS6 105 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 TLX2O43763 284 aaPredicted RBP12.78□□□□□ -0.36
TTC39B-201ENST00000297615 ACADMP11310 421 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 RGS6P49758 472 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 ITPRIPL2Q3MIP1 535 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 MSANTD1Q6ZTZ1 278 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 NRSN1Q8IZ57 195 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 SMAP2Q8WU79 429 aaPredicted RBP12.78□□□□□ -0.36
TTC39B-201ENST00000297615 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 MAPKAP1Q9BPZ7 522 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 MROQ9BYG7 248 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 DPEP2Q9H4A9 486 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 ADAP2Q9NPF8 381 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 CXCR4P61073 352 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 HYAL1Q12794 435 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 LIPKQ5VXJ0 399 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 NEK10Q6ZWH5 1172 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 VRK2Q86Y07 508 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 FBLIM1Q8WUP2 373 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 SFXN1Q9H9B4 322 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 TSC22D4Q9Y3Q8 395 aa12.78□□□□□ -0.36
TTC39B-201ENST00000297615 LOC105369274A0A096LPK9 316 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 LOC102723532A0A0G2JNH3 316 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 DSCR3O14972 297 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 KMOO15229 486 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 CAPN5O15484 640 aaPredicted RBP12.77□□□□□ -0.36
TTC39B-201ENST00000297615 LAMP2P13473 410 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 ITGA2P17301 1181 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 GRK3P35626 688 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 CASP12Q6UXS9 341 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 Q6ZS52 159 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 RNF165Q6ZSG1 346 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 ARMC8Q8IUR7 673 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 OR4N4Q8N0Y3 316 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 ACOT4Q8N9L9 421 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 RPLP0P6Q8NHW5 317 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.36
TTC39B-201ENST00000297615 TREX2Q9BQ50 279 aaPredicted RBP12.77□□□□□ -0.36
TTC39B-201ENST00000297615 BTBD2Q9BX70 525 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 MS4A8Q9BY19 250 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 POLR2J3Q9H1A7 115 aaKnown RBP12.77□□□□□ -0.36
TTC39B-201ENST00000297615 CLN6Q9NWW5 311 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 PCDHGB1Q9Y5G3 927 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 ENPP4Q9Y6X5 453 aa12.77□□□□□ -0.36
TTC39B-201ENST00000297615 SERPINI2O75830 405 aa12.77□□□□□ -0.37
TTC39B-201ENST00000297615 KRT75O95678 551 aa12.77□□□□□ -0.37
TTC39B-201ENST00000297615 NR4A2P43354 598 aa12.77□□□□□ -0.37
TTC39B-201ENST00000297615 CRISP1P54107 249 aa12.77□□□□□ -0.37
TTC39B-201ENST00000297615 HEPACAMQ14CZ8 416 aa12.77□□□□□ -0.37
TTC39B-201ENST00000297615 GPR68Q15743 365 aa12.77□□□□□ -0.37
TTC39B-201ENST00000297615 DUSP6Q16828 381 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms