RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ARRDC2Q8TBH0 407 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 AKAP1Q92667 903 aaKnown RBP eCLIP12.8□□□□□ -0.36
HPS3-201ENST00000296051 C17orf62Q9BQA9 187 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 FUZQ9BT04 418 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 C19orf25Q9UFG5 118 aaPredicted RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 TBC1D24Q9ULP9 559 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 EP300Q09472 2414 aaPredicted RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 ECM29Q5VYK3 1845 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 TLX3O43711 291 aaPredicted RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 AKAP8O43823 692 aaKnown RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 HLA-DPB1P04440 258 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 SRPRAP08240 638 aaKnown RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 ADRB3P13945 408 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 IRS1P35568 1242 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 LIPAP38571 399 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 SLC9A3P48764 834 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 CLDN2P57739 230 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 RACK1P63244 317 aaKnown RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 LYSMD4Q5XG99 296 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 KLHL24Q6TFL4 600 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 ZNF783Q6ZMS7 281 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 OR6K6Q8NGW6 343 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 PGAP3Q96FM1 320 aaPredicted RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 OARD1Q9Y530 152 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 C2orf74A8MZ97 194 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 WWP2O00308 870 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 C1QAP02745 245 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 PTGER1P34995 402 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 GMFBP60983 142 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 TDGQ13569 410 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 LEXMQ3ZCV2 418 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 OLFML2AQ68BL7 652 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 NCEH1Q6PIU2 408 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 PAMR1Q6UXH9 720 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 DOK4Q8TEW6 326 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 ISL2Q96A47 359 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 METTL7AQ9H8H3 244 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 BRD7Q9NPI1 651 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 MAFFQ9ULX9 164 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 CABIN1Q9Y6J0 2220 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 ATRXP46100 2492 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 BTAF1O14981 1849 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 COQ9O75208 318 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 MRPL3P09001 348 aaKnown RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 MTHFD2P13995 350 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 RPS15P62841 145 aaKnown RBP12.8□□□□□ -0.36
HPS3-201ENST00000296051 OXA1LQ15070 435 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 REEP3Q6NUK4 255 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 NUP54Q7Z3B4 507 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 KLHL36Q8N4N3 616 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 SPPL3Q8TCT6 385 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 ACPTQ9BZG2 426 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 FXYD6-FXYD2A0A087WZ82 144 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 IRGMA1A4Y4 181 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 APBB3O95704 486 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 DRD5P21918 477 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 HNRNPA2B1P22626 353 aaKnown RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 ADRA1AP35348 466 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 HNRNPFP52597 415 aaKnown RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 HHEXQ03014 270 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 ADAM15Q13444 863 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 DEFB134Q4QY38 66 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 TMEM240Q5SV17 173 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 C1orf189Q5VU69 101 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 TANGO2Q6ICL3 276 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 MTFR2Q6P444 385 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 C1orf216Q8TAB5 229 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 FXYD6Q9H0Q3 95 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 MAGIXQ9H6Y5 334 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 GORASP2Q9H8Y8 452 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 KCNK12Q9HB15 430 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 PAK6Q9NQU5 681 aaPredicted RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 CAPN5O15484 640 aaPredicted RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 PCDHGA12O60330 932 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 SRCP12931 536 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 CDKN2CP42773 168 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 GRK6P43250 576 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 SMSP52788 366 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 CRISP3P54108 245 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 SLC5A11Q8WWX8 675 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 ERMAPQ96PL5 475 aaPredicted RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 CALML5Q9NZT1 146 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 DNMT3BQ9UBC3 853 aaKnown RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 E2F3O00716 465 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 PTHP01270 115 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 ATP5A1P25705 553 aaKnown RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 STOMP27105 288 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 GDI2P50395 445 aaKnown RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 GP2P55259 537 aaKnown RBP12.79□□□□□ -0.36
HPS3-201ENST00000296051 DEFB133Q30KQ1 61 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 TTLL10Q6ZVT0 673 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 NOXA1Q86UR1 476 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 PIP5K1AQ99755 562 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 TMEM30AQ9NV96 361 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 ABCD2Q9UBJ2 740 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 ASB1Q9Y576 335 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 IRAK3Q9Y616 596 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 IFNA7P01567 189 aa12.79□□□□□ -0.36
HPS3-201ENST00000296051 SLC6A11P48066 632 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms