RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 STK32CQ86UX6 486 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF595Q8IYB9 648 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 GHDCQ8N2G8 530 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 TANKQ92844 425 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 CCDC115Q96NT0 180 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 OR8D2Q9GZM6 311 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 SLC26A1Q9H2B4 701 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 ACSS1Q9NUB1 689 aaPredicted RBP7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 C14orf105Q9NVL8 296 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 SCN3BQ9NY72 215 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 MMACHCQ9Y4U1 282 aa7.94□□□□□ -1.14
PTPDC1-201ENST00000288976 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF749O43361 778 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 HCRTR1O43613 425 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 GDF9O60383 454 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 UBOX5O94941 541 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 DBIP07108 87 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 CCNOP22674 350 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 PSMA4P25789 261 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 OTX2P32243 289 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MAGEA8P43361 318 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 CASP6P55212 293 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MYBPC1Q00872 1141 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 KCNAB1Q14722 419 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 PTGR1Q14914 329 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MAPKAPK3Q16644 382 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 CPTPQ5TA50 214 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 SLC48A1Q6P1K1 146 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 C16orf89Q6UX73 402 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 PSMA8Q8TAA3 256 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 VANGL1Q8TAA9 524 aaPredicted RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 OR6C1Q96RD1 312 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 TAAR9Q96RI9 348 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ACTR5Q9H9F9 607 aaPredicted RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ARL8BQ9NVJ2 186 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ARMCX1Q9P291 453 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 CES1P1Q9UKY3 287 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 LOXL2Q9Y4K0 774 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MUC3AQ02505 3323 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 IGLV3-12A0A075B6K2 115 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MYOCOSA0A1B0GUC4 107 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 AP3D1O14617 1153 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 FTH1P19P0C7X4 201 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 BMP7P18075 431 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 TACR1P25103 407 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ITGA3P26006 1051 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 IL12AP29459 219 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 KCNJ2P63252 427 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ID2Q02363 134 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 LRIF1Q5T3J3 769 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 GALNT15Q8N3T1 639 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 FAM47BQ8NA70 645 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 OR10H5Q8NGA6 315 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 DOK4Q8TEW6 326 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MOAP1Q96BY2 351 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 PPCDCQ96CD2 204 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ITCHQ96J02 903 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 SH3GL1Q99961 368 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 LRMDAQ9H2I8 198 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MMADHCQ9H3L0 296 aaPredicted RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MKKSQ9NPJ1 570 aaPredicted RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 SLAMF7Q9NQ25 335 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MRPS7Q9Y2R9 242 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 SH3GLB1Q9Y371 365 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MDC1Q14676 2089 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF462Q96JM2 2506 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 SAC3D1A6NKF1 404 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 CPSF4LA6NMK7 179 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 AIFM1O95831 613 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 SAGP10523 405 aaPredicted RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 RNH1P13489 461 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 HOXB9P17482 250 aaPredicted RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 RORAP35398 523 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 KIR3DL1P43629 444 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 C2orf80Q0P641 193 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 TMED1Q13445 227 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 TLR1Q15399 786 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 DNAL1Q4LDG9 190 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 NDUFAF5Q5TEU4 345 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 ZNF385CQ66K41 422 aaPredicted RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 GK5Q6ZS86 529 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 NAXEQ8NCW5 288 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 DEFB124Q8NES8 71 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 PELOQ9BRX2 385 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 SORBS1Q9BX66 1292 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 RNF121Q9H920 327 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 MRPS2Q9Y399 296 aaKnown RBP7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 PCDHGA8Q9Y5G5 932 aa7.93□□□□□ -1.14
PTPDC1-201ENST00000288976 A0A096LPI6 279 aa7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 C15orf38-AP3S2A0A0A6YYH1 394 aa7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 CYR61O00622 381 aa7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 CSO75390 466 aaKnown RBP7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 PGRP06401 933 aa7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 T-ENOLP0DO92 83 aa7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 FBLP22087 321 aaKnown RBP7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 CPN2P22792 545 aa7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 PCBP4P57723 403 aaKnown RBP7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 CPZQ66K79 652 aa7.92□□□□□ -1.14
PTPDC1-201ENST00000288976 DEF8Q6ZN54 512 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms