RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SVBPQ8N300 66 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 CSNK2A3Q8NEV1 391 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 C16orf78Q8WTQ4 265 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 DCUN1D4Q92564 292 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SLA2Q9H6Q3 261 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SMCO4Q9NRQ5 59 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PLCXD1Q9NUJ7 323 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 KLHL9Q9P2J3 617 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 AK1P00568 194 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 MAS1P04201 325 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 ATP4BP51164 291 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SLAMF1Q13291 335 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 APOBEC3HQ6NTF7 200 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 FAM122CQ6P4D5 195 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SCML4Q8N228 414 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SDSLQ96GA7 329 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 A6NCN8 305 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 A8MT66 165 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 K7EPK0 472 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CRTAPO75718 401 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 PRKACAP17612 351 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 RAB3BP20337 219 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 NRLP54845 237 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 METTL11BQ5VVY1 283 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 TMEM236Q5W0B7 351 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 LYSMD3Q7Z3D4 306 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 FAM71E2Q8N5Q1 922 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CACNG6Q9BXT2 260 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 GOLGA2P5Q9HBQ8 144 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 POT1Q9NUX5 634 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 GPR137BO60478 399 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CSTAP01040 98 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 NKX3-2P78367 333 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CCNJQ5T5M9 372 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 FAM199XQ6PEV8 388 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 IDO2Q6ZQW0 420 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 KCTD20Q7Z5Y7 419 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 MMAAQ8IVH4 418 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 HAVCR2Q8TDQ0 301 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 FCRL5Q96RD9 977 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 TPPPO94811 219 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 STATHP02808 62 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 ALDOBP05062 364 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 BPIP17213 487 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 DGKQP52824 942 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SIRPB2Q5JXA9 342 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 RAET1LQ5VY80 246 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 EEF1DP3Q658K8 133 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 NIPA2Q8N8Q9 360 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 FNDC8Q8TC99 324 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 UPRTQ96BW1 309 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CASD1Q96PB1 797 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 EBF4Q9BQW3 602 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SEZ6LQ9BYH1 1024 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SLC2A4RGQ9NR83 387 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 HEBP1Q9NRV9 189 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 FBXL12Q9NXK8 326 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 DLGAP4Q9Y2H0 992 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 IRS2Q9Y4H2 1338 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CD8B2A6NJW9 211 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 TOR1AO14656 332 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 FMO6PO60774 539 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 JMJD7P0C870 316 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CD8BP10966 210 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CREB1P16220 341 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 PITPNBP48739 271 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 MEF2DQ14814 521 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 C22orf42Q6IC83 251 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 TICAM1Q8IUC6 712 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 MS4A15Q8N5U1 240 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 PPP1R35Q8TAP8 253 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SLC2A12Q8TD20 617 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 TRMT2BQ96GJ1 504 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF382Q96SR6 550 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 HDHD5Q9BXW7 423 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 A0A096LPI6 279 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 CD300LBA8K4G0 201 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 A8MVM7 634 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 KLF11O14901 512 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 FBLP22087 321 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 RPL13AP40429 203 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 GCGRP47871 477 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SNU13P55769 128 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 PRAMEF19Q5SWL8 479 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 C6orf141Q5SZD1 244 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 DEFB118Q96PH6 123 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 DOHHQ9BU89 302 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 SARDHQ9UL12 918 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 KIAA0513O60268 411 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 MAP2K4P45985 399 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 HADHBP55084 474 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF92Q03936 586 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 UGT3A2Q3SY77 523 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 INTS5Q6P9B9 1019 aaKnown RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 ARL14EPQ8N8R7 260 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-201ENST00000282516 OR9K2Q8NGE7 335 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 OR4D6Q8NGJ1 314 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 OR5L2Q8NGL0 311 aa8.36□□□□□ -1.07
NIPBL-201ENST00000282516 PRRT1Q99946 306 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms