RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 XCR1P46094 333 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 OCA2Q04671 838 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 MICAQ29983 383 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 ZNF607Q96SK3 696 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 A4GALTQ9NPC4 353 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 TAS2R7Q9NYW3 318 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 KLHL3Q9UH77 587 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 UNC13CQ8NB66 2214 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 A0A1W2PPW3 197 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 TRIM64A6NGJ6 449 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 ATE1O95260 518 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 FADS2O95864 444 aaKnown RBP16.89■□□□□ 0.29
CAPN1-201ENST00000279247 LSM11P83369 360 aaKnown RBP eCLIP16.89■□□□□ 0.29
CAPN1-201ENST00000279247 HOXC5Q00444 222 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 XAF1Q6GPH4 301 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 GPBAR1Q8TDU6 330 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 ZDHHC1Q8WTX9 485 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 ZFYVE21Q9BQ24 234 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 NMNAT1Q9HAN9 279 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-201ENST00000279247 EHD3Q9NZN3 535 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 FBXL21Q9UKT6 434 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 TMEM265A0A087WTH1 108 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 CCNB2O95067 398 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 IGFBP1P08833 259 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-201ENST00000279247 RFX3P48380 749 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 ROR2Q01974 943 aaKnown RBP16.89■□□□□ 0.29
CAPN1-201ENST00000279247 SUZ12Q15022 739 aaKnown RBP16.89■□□□□ 0.29
CAPN1-201ENST00000279247 FAM111BQ6SJ93 734 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 TBC1D20Q96BZ9 403 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 NRBF2Q96F24 287 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 YTHDF1Q9BYJ9 559 aaKnown RBP16.89■□□□□ 0.29
CAPN1-201ENST00000279247 IRAK4Q9NWZ3 460 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 CES1P1Q9UKY3 287 aa16.89■□□□□ 0.29
CAPN1-201ENST00000279247 NDRG4Q9ULP0 352 aaKnown RBP16.89■□□□□ 0.29
CAPN1-201ENST00000279247 A0A1W2PPC4 97 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 C2orf74A8MZ97 194 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 OR10H3O60404 316 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 TBX19O60806 448 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 NDUFS2O75306 463 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 GASTP01350 101 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 CD247P20963 164 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 LSM3P62310 102 aaKnown RBP16.88■□□□□ 0.29
CAPN1-201ENST00000279247 NPTX1Q15818 432 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 ZC3H12BQ5HYM0 836 aaKnown RBP16.88■□□□□ 0.29
CAPN1-201ENST00000279247 BORAQ6PGQ7 559 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 P3H2Q8IVL5 708 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 NATD1Q8N6N6 113 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 ARSGQ96EG1 525 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 FAM60AQ9NP50 221 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 PSME2Q9UL46 239 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 TRIM64CA6NLI5 447 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 FAM170BA6NMN3 283 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 B3GALT2O43825 422 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 SERPINB7O75635 380 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 CDC123O75794 336 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-201ENST00000279247 ST6GAL1P15907 406 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 KRT20P35900 424 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 SHC2P98077 582 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 FUT5Q11128 374 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 MAD2L1BPQ15013 274 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-201ENST00000279247 TCTN3Q6NUS6 607 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 ENTHD1Q8IYW4 607 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 SIX5Q8N196 739 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 ELP4Q96EB1 424 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 LRRC61Q9BV99 259 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 ADAP2Q9NPF8 381 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 MKLN1Q9UL63 735 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 PCDHGA6Q9Y5G7 932 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 SGK494L7N484 410 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 CDH3P22223 829 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 RYKP34925 604 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 KHKP50053 298 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 CRISP3P54108 245 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 KCNC4Q03721 635 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 OR7G2Q8NG99 324 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 OR4C15Q8NGM1 316 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 LMX1AQ8TE12 382 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 OR7D2Q96RA2 312 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 ARMC7Q9H6L4 198 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 THSD1Q9NS62 852 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 SELENONQ9NZV5 590 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 COL4A2P08572 1712 aa16.88■□□□□ 0.29
CAPN1-201ENST00000279247 H3BMQ9 156 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 NTN1O95631 604 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 FHP07954 510 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 RHCEP18577 417 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 PRR5P85299 388 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 CHRNEQ04844 493 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 SEC23BQ15437 767 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 CCNJQ5T5M9 372 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 CWF19L1Q69YN2 538 aaKnown RBP16.87■□□□□ 0.29
CAPN1-201ENST00000279247 SYT13Q7L8C5 426 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 C16orf62Q7Z3J2 963 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 KRT73Q86Y46 540 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 AVL9Q8NBF6 648 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 SLC16A11Q8NCK7 471 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 COG8Q96MW5 612 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 C11orf16Q9NQ32 467 aa16.87■□□□□ 0.29
CAPN1-201ENST00000279247 RNF6Q9Y252 685 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms