RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ERP44Q9BS26 406 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 PRDM14Q9GZV8 571 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 CLEC4MQ9H2X3 399 aaPredicted RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 CXorf21Q9HAI6 301 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 QPCTLQ9NXS2 382 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 WHRNQ9P202 907 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 OPTCQ9UBM4 332 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SLC6A5Q9Y345 797 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 RNF11Q9Y3C5 154 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 PCDHGB3Q9Y5G1 929 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 FN1P02751 2386 aaKnown RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 ANKRD33BA6NCL7 494 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 OR7A17O14581 309 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 EIF3HO15372 352 aaKnown RBP eCLIP8.18□□□□□ -1.1
TPM3-201ENST00000271850 OIP5O43482 229 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 EPPINO95925 133 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 ALDOAP04075 364 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 HPNP05981 417 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 LTA4HP09960 611 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 FAM58BPP0C7Q3 252 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 CTAGE8P0CG41 777 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 NR2F6P10588 404 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 COX7A2P14406 83 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 GABRA1P14867 456 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 KLK2P20151 261 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 BMP5P22003 454 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 KIR2DL3P43628 341 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 CDK9P50750 372 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 ADAM8P78325 824 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 FUT7Q11130 342 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 PFKFB4Q16877 469 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 GRTP1Q5TC63 336 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 VASNQ6EMK4 673 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 RNF111Q6ZNA4 994 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 RPS27LQ71UM5 84 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 GOLGA7Q7Z5G4 137 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 CTAGE4Q8IX94 777 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 CTAGE3PQ8IX95 158 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 PRR22Q8IZ63 422 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 PLD6Q8N2A8 252 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 PPM1NQ8N819 430 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 L3MBTL4Q8NA19 623 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 C9orf106Q8NAJ2 232 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 SPATA4Q8NEY3 305 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 OR52B6Q8NGF0 335 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 FBF1Q8TES7 1133 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 RIT1Q92963 219 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 UBE2E3Q969T4 207 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 RGMAQ96B86 450 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 RBM18Q96H35 190 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 WDYHV1Q96HA8 205 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 JSRP1Q96MG2 331 aaPredicted RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 RILPQ96NA2 401 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 NSUN5Q96P11 429 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 GNRHR2Q96P88 292 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 DOHHQ9BU89 302 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 G6PC3Q9BUM1 346 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 ANGPTL4Q9BY76 406 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 POLDIP3Q9BY77 421 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 EXO5Q9H790 373 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 ZBTB26Q9HCK0 441 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 JKAMPQ9P055 326 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 CES1P1Q9UKY3 287 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 BOKQ9UMX3 212 aaPredicted RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 C15orf41Q9Y2V0 281 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 IKBKGQ9Y6K9 419 aa8.18□□□□□ -1.1
TPM3-201ENST00000271850 ANK3Q12955 4377 aaKnown RBP8.18□□□□□ -1.1
TPM3-201ENST00000271850 C15orf38-AP3S2A0A0A6YYH1 394 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 MBD3L4A6NDZ8 208 aaPredicted RBP8.17□□□□□ -1.1
TPM3-201ENST00000271850 MBD3L3A6NE82 208 aaPredicted RBP8.17□□□□□ -1.1
TPM3-201ENST00000271850 MBD3L5A6NJ08 208 aaPredicted RBP8.17□□□□□ -1.1
TPM3-201ENST00000271850 C17orf51A8MQB3 221 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 PPP6CO00743 305 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 LILRA1O75019 489 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ATE1O95260 518 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ACSL3O95573 720 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 C2P06681 752 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 SLC35E2P0CK97 266 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 EPB42P16452 691 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 BMP7P18075 431 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 GPX3P22352 226 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 TACR1P25103 407 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 GDF1P27539 372 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 PTPN6P29350 595 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 SERPINB3P29508 390 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 SERPINB1P30740 379 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 UQCRC1P31930 480 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 GALNSP34059 522 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 SPRP35270 261 aaPredicted RBP8.17□□□□□ -1.1
TPM3-201ENST00000271850 TIMP3P35625 211 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 CASP3P42574 277 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ASCL1P50553 236 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 RAP1GDS1P52306 607 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ARFIP1P53367 373 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 NAGLUP54802 743 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 FOXF2Q12947 444 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 TRAF3Q13114 568 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 CUL3Q13618 768 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 RPS6KA2Q15349 733 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 PCBP2Q15366 365 aaKnown RBP eCLIP8.17□□□□□ -1.16e-13■■■□□ 18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms