RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CTXN3Q4LDR2 81 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 IFI44LQ53G44 452 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 MZT2AQ6P582 158 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 C17orf107Q6ZR85 190 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 OTOP2Q7RTS6 562 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 C7orf57Q8NEG2 295 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 OR8J2Q8NGG1 315 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 C2orf15Q8WU43 125 aaKnown RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 SMG7Q92540 1137 aaKnown RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 TSSK6Q9BXA6 273 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 RNF208Q9H0X6 261 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 ABCG5Q9H222 651 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 DLL4Q9NR61 685 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 MED9Q9NWA0 146 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 SCP2D1Q9UJQ7 156 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 NUP214P35658 2090 aaPredicted RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 KCNE1BA0A087WTH5 132 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 LOC105369274A0A096LPK9 316 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 AMD1P17707 334 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 ATP5C1P36542 298 aaKnown RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 HNMTP50135 292 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 AP1S1P61966 158 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 TWF1Q12792 350 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 NFATC2Q13469 925 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 CAMK1Q14012 370 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 ARHGEF7Q14155 803 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 ARHGAP15Q53QZ3 475 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 ATAT1Q5SQI0 421 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 RGS7BPQ6MZT1 257 aaPredicted RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 QSOX2Q6ZRP7 698 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 OR4N4Q8N0Y3 316 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 STPG2Q8N412 459 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 FTMTQ8N4E7 242 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 MYO19Q96H55 970 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 SENP5Q96HI0 755 aaPredicted RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 CXorf58Q96LI9 332 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 SEC22CQ9BRL7 303 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 ASB8Q9H765 288 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 TPT1P8Q9HAU6 139 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 TET1Q8NFU7 2136 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 ZNF106Q9H2Y7 1883 aaKnown RBP12.44□□□□□ -0.42
NUP54-201ENST00000264883 TEX13CA0A0J9YWL9 993 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 F8W036 122 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 F8W810 466 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 J3KTA2 159 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 STK25O00506 426 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 GPR171O14626 319 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 LRRTM2O43300 516 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 GASTP01350 101 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 COL19A1Q14993 1142 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.42
NUP54-201ENST00000264883 SPIN4Q56A73 249 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 CLLU1OSQ5K130 101 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 ARMC12Q5T9G4 340 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 OVCA2Q8WZ82 227 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 SMIM14Q96QK8 99 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 COPS8Q99627 209 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 CD93Q9NPY3 652 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 PFDN2Q9UHV9 154 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 PCDHB11Q9Y5F2 797 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 ABCD4O14678 606 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 LANCL1O43813 399 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 B4GALT3O60512 393 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 TSPAN3O60637 253 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 GCM2O75603 506 aaPredicted RBP12.44□□□□□ -0.42
NUP54-201ENST00000264883 NCR1O76036 304 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 IFNA14P01570 189 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 C8GP07360 202 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 LCN1P31025 176 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 PCGF2P35227 344 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 FEN1P39748 380 aaKnown RBP12.44□□□□□ -0.42
NUP54-201ENST00000264883 GSTM5P46439 218 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 MRPL58Q14197 206 aaKnown RBP12.44□□□□□ -0.42
NUP54-201ENST00000264883 OPCMLQ14982 345 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 NTRK2Q16620 822 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 TMEM201Q5SNT2 666 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 NOXRED1Q6NXP6 359 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 ZNF600Q6ZNG1 722 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 CLECL1Q8IZS7 167 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 CBARPQ8N350 705 aaPredicted RBP12.44□□□□□ -0.42
NUP54-201ENST00000264883 ATAD1Q8NBU5 361 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 SCRN2Q96FV2 425 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 SLC38A2Q96QD8 506 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 H2AFJQ9BTM1 129 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 NLNQ9BYT8 704 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 DPAGT1Q9H3H5 408 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 SLAMF7Q9NQ25 335 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 ACER3Q9NUN7 267 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 LHX3Q9UBR4 397 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 SPATA2Q9UM82 520 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 CACNG2Q9Y698 323 aa12.44□□□□□ -0.42
NUP54-201ENST00000264883 H0YC42 278 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 DNASE2O00115 360 aaPredicted RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 CASC3O15234 703 aaKnown RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 SLC19A2O60779 497 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 TOXO94900 526 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 GADD45GO95257 159 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 SULT1A3P0DMM9 295 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms